Published September 9, 2025 | Version v1

Datasets underlying the publication "A method for in-depth analysis of circular DNA virus populations by unambiguously profiling the low abundant virus variants and partial genomic components"

  • 1. ROR icon KU Leuven
  • 2. ROR icon Emweb (Belgium)

Description

These datasets are underlying the scientific publication titled "A method for in-depth analysis of circular DNA virus populations by unambiguously profiling the low abundant virus variants and partial genomic components", published in the Nucleic Acids Research journal. 

Short read and Nanopore raw sequence data of TYLCSV and BBTV viruses are available at Sequence Read Archive (https://www.ncbi.nlm.nih.gov/sra/PRJNA1113217). Full length annotated genome sequences (TYLCSV-BBTV-Genome-Detective-variants.rar) and short read mapping files (TYLCSV-BGI-mapping.bam; TYLCSV-genome-Nanopore.fasta) are freely available at https://zenodo.org/records/11099227.

Additionally, supplementary data to the publication is provided at the Nucleic Acids Research journal, as well as here on Zenodo. 

The provided information in the datasets are further discussed and interpreted in detail, as well as their subsequent results, in the scientific publication.

VIRTIGATION is part of the EU Open Research Data pilot. This project has received funding from the European Union's Horizon 2020 research and innovation program under grant agreement No. 101000570.

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Additional details

Funding

European Commission
VIRTIGATION - EMERGING VIRAL DISEASES IN TOMATOES AND CUCURBITS: IMPLEMENTATION OF MITIGATION STRATEGIES FOR DURABLE DISEASE MANAGEMENT 101000570