Published 2025 | Version v2
Dataset Open

Phylogenomic signatures of repeat-induced point mutations across the fungal kingdom

Description

Supporting information

Supplementary figures :  Supplementary_figures.pdf

Supplementary tables :  Supplementary_tables.xlsx

Orthogroups and their assigned proteins : 1KFungi_orthogroups.txt

Most recurrent PFAM hit for proteins belonging to the orthogroup : 1kOrthogroups_top1PFAM.txt

Fungal phylogeny in newick format : 1kFungi_totalBases.tree

Summary table of presence/absence of RIP-related proteins : 1kFungi_RIP_genes_table.txt

Protein names NCBI correspondence : 1KFungi_metadata_pepID.txt

Script to perform k-mer analysis and infer RIP activity : kmer_analysis.py

Source data files underlying all figures : SourceData.xlsx

Files

1KFungi_metadata_pepID.txt

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Additional details

Dates

Available
2025