Published May 8, 2025 | Version 1.0
Dataset Open

Influenza genomics resources for Galaxy

  • 1. ROR icon University of Freiburg

Description

Per-segment reference sequence data for Influenza A

This data can be used with https://github.com/connor-lab/vapor to pick a reference for each segment that is close enough to sequenced Influenza A reads to enable successful mapping.

https://iwc.galaxyproject.org/workflow/influenza-isolates-consensus-and-subtyping-main/ is a Galaxy workflow that uses this strategy and that can use this data as input if it's uploaded to a Galaxy server and turned into a collection there.

Files

README.md

Files (318.4 MB)

Name Size Download all
md5:e6f4f8c75d5da2fb16572e842bb1bd66
50.1 MB Download
md5:f7abc12e5505bdc6b94f8c1d000a8372
49.6 MB Download
md5:5eeae2f2c9ae1d05412e1f53ba89d212
48.3 MB Download
md5:eed6c6a300d3db8038a53c3eb8e17d09
60.1 MB Download
md5:57a1d6279a95f77d5b7900220e3e743e
30.3 MB Download
md5:6a64da25ced71197cfd68195bdfe9aae
42.8 MB Download
md5:cd1874b5e1663685e764c9bd6cfc5032
20.5 MB Download
md5:1f76e89bcd5536b58d73d3a7d155449d
16.7 MB Download
md5:d6068b0ca735262e4667f9767dcc63dc
472 Bytes Preview Download
md5:f3eea59fa5c9b085660d631cb5b39131
3.0 kB Download

Additional details

Related works

Is supplement to
Workflow: 10.5281/zenodo.15078914 (DOI)

Dates

Collected
2024-11-18

Software

Programming language
Python
Development Status
Active