Inter- and intra-specific variation in the degree of marine-derived resources of amphidromous fishes
Creators
Description
# Raw data: Data for the manuscript entitled “Inter- and intra-specific variation in the degree of marine-derived resources of amphidromous fishes”
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## Description of the data
# data_SL_composition: Information for all individuals of subsamples measured standard length and wet weight
no: Row number
Sample_No: ID for each specimen
Date: Year/Month/Date surveyed
Site: Study sites
Species: Genus and Species name for each specimen
SL: Standard length (mm) of fish. NA = no data available
BW: Wet weight (g) of fish.
Migration_Group: Migration group. 0: Settled individuals; 1: Individuals in first migration group; 2: Individuals in second migration group
Season: Season each specimen captured. Spr: February, March, April and May in 2023; Sum: June, July and August in 2023; Fall: September, October and November in 2023; Win: December in 2023, January and February in 2024
# S_isotope: Information for all specimens of sulfur isotope analysis
no: Row number
ID: ID for each specimen
Date: Year/Month/Date surveyed
Site: Study sites
Species: Genus and Species name for each specimen or water
Type: Type of each specimen. Adu: Settled individuals of amphidromous fish; Base_FW: Baseline of Freshwater site; Base_Sea: Baseline of ocean site; Mig: migrants of amphidromous fish
SL: Standard length (mm) of fish. NA = no data available
BW: Wet weight (g) of fish. NA = no data available
Rec_Tim: Recruitment timing for each individual. N: Not migrants; E: Early recruitment period; M: Middle recruitment period; L: Late recruitment period
Origin: Origin for each specimen. F: Freshwater; M: Migrants; S: Ocean
x_category: Fish categories for inter-specific comparison (Figure 4a)
Calib_d34S: The calibrated value of δ34S for each specimen
Group_mig: The migration group for each individual. 0: no migrants; 1: 1st migrants; 2: 2nd migrants
# data_source: The source data for mixing models
Source: Source of migrants. Girella_punctata: marine-derived source; F_Fish: freshwater-derived source
MeanCalib_d34S: Mean of d34S of source individuals
SDCalib_d34S: standard deviation of d34S of source individuals
n: Number of samples
# data_discrimination: The discrimination data for mixing models
Source: Source of migrants. Girella_punctata: marine-derived source; F_Fish: freshwater-derived source
MeanCalib_d34S: Mean discrimination value of d34S.
SDCalib_d34S: standard deviation of discrimination value of d34S.
\## Sharing/Access information
No other data sharing sources are available.
Please contact the corresponding author (Ryosuke Tanaka: rtanaka@ecology.kyoto-u.ac.jp) if you are interested in using the data.
\## Code/Software
Data analysis was conducted using R version 4.3.2 and the following R packages: car (v3.1.2), ggpattern (v1.0.1), ggpubr(v0.6.0), HDInterval(v.0.2.4), MixSIAR(v3.1.12), NSM3 (v1.18), rjags(v4.16), and tidyverse (v2.0.0).
Analysis scripts deposited in Zenodo: doi: 10.5281/zenodo.15363380
Files
data_discrimination.csv
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