Published August 2025 | Version 1.0
Dataset Open

Computational pathology annotation enhances the resolution and interpretation of breast cancer spatial transcriptomics data

Description

This dataset contains two zipped folders:

  • images
  • spaceranger outputs

needed to reproduce the paper entitled "Computational pathology annotation enhances the resolution and interpretation of breast cancer spatial transcriptomics data". A README file accompanies each folder with details on the files within that folder. The scripts for the analysis are deposited in GitHub with the link attached.

Files

Images.zip

Files (11.7 GB)

Name Size Download all
md5:eb023fe37217d5d52b47b155be510e81
10.1 GB Preview Download
md5:b6373eca73ea86ae15803e861ad8dc20
1.5 GB Preview Download

Additional details

Software

Repository URL
https://github.com/JohanHartmanGroupBioteam/BreastCancer_CTA
Programming language
R, Python