Published December 31, 2017
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Table 1 in Unrecorded bacterial species belonging to the phylum Actinobacteria originated from Republic of Korea
Authors/Creators
- 1. Department of Biology, Sunchon National University, Suncheon 57922, Republic of Korea
- 2. Department of Microbiology, Chungnam National University, Daejeon 34134, Republic of Korea
- 3. Department of Biological Sciences, Inha University, Incheon 22212, Republic of Korea
- 4. Department of Science Education, Jeju National University, Jeju 63243, Republic of Korea
- 5. Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Gyeonggi 17035, Republic of Korea
- 6. Department of Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea
- 7. Department of Biotechnology, Hankyong National University, Anseong 17579, Republic of Korea
- 8. Department of Biology, Kyung Hee University, Seoul 02447, Republic of Korea
- 9. Department of Life Sciences, Chonbuk National University, Jeonju 54896, Republic of Korea
Description
Table 1. Taxonomic affiliation and isolation information of the isolates belonging to the phylum Actinobacteria.
| Suborder | Family | Genus | Strain ID | NIBR NO. | Most closely related species | Similarity (%) | Isolation Source Medium | Incubation condition | |
|---|---|---|---|---|---|---|---|---|---|
| Micrococcineae | Cellulomonadaceae | Cellulomonas | KHH20 RDH8 | NIBRBAC000497852 NIBRBAC000498079 | Cellulomonas denverensis W6929T Cellulomonas soli Kc 1T | 99.64 99.64 | Gut of japanese crested ibis Fresh water | R2A R2A | 25℃, 3d 30℃, 2d |
| Dermabacteraceae Dermacoccaceae Intrasporangiaceae | Brachybacterium Dermacoccus Arsenicicoccus Janibacter Phycicoccus | Ho-10 KYW950 LPB0110 KYW1206 HKS12 | NIBRBAC000498105 NIBRBAC000497927 NIBRBAC000497985 NIBRBAC000497943 NIBRBAC000498111 | Brachybacterium paraconglomeratum LMG 19861T Dermacoccus barathri MT 2T Arsenicicoccus bolidensis CCUG 47306T Janibacter indicus 0704P10-1T Phycicoccus ochangensis L1b-b9T | 99.93 100.0 99.92 99.65 99.08 | Activated sludge Sea water Sea water Sea water Ginseng | R2A MA MA MA R2A | 30℃, 2d 25℃, 3d 26℃, 1d 25℃, 4d 30℃, 2d | |
| Microbacteriaceae | Agrococcus | HKS25 | NIBRBAC000498117 | Agrococcus lahaulensis DSM 17612T | 99.58 | cultivated soil Ginseng | R2A | 30℃, 2d | |
| Humibacter Leifsonia | C4-1 HKS09 | NIBRBAC000498029 NIBRBAC000498109 | Humibacter antri D7-27T Leifsonia lichenia 2Sb T | 99.72 98.75 | cultivated soil Natural cave Ginseng | ISP2 R2A | 30℃, 7d 30℃, 2d | ||
| Microbacterium | C7-7 C1-46 HMF4427 | NIBRBAC000498033 NIBRBAC000498021 NIBRBAC000497916 | Leifsonia soli TG-S248T Microbacterium aoyamense KV-492T Microbacterium arborescens DSM 20754T | 99.25 99.22 99.92 | cultivated soil Natural cave Natural cave Fermented food | TSA TSA MA | 30℃, 4d 30℃, 7d 30℃, 3d | ||
| KHC15 | NIBRBAC000497842 | Microbacterium esteraromaticum DSM 8609T | 99.79 | Gut of redcrowned crane | NA | 25℃, 3d | |||
| IMCC25612 LPB0100 Ho-14 | NIBRBAC000498002 NIBRBAC000497980 NIBRBAC000498106 | Microbacterium ketosireducens DSM 12510T Microbacterium marinum H101T Microbacterium oleivorans DSM 16091T | 100 100.0 99.64 | Fresh water Sea water Activated | R2A MA R2A | 20°C, 10d 26℃, 1d 30℃, 2d | |||
| KHG7 | NIBRBAC000497857 | Microbacterium paraoxydans CF 36T | 99.57 | sludge Gut of red- | NA | 25℃, 3d | |||
| Micrococcaceae | Mycetocola Arthrobacter Kocuria | DO214 IMCC25611 HMF3875 KHK4 IMCC25615 LPB0092 bT304 | NIBRBAC000498052 NIBRBAC000498001 NIBRBAC000497900 NIBRBAC000497856 NIBRBAC000498005 NIBRBAC000497975 NIBRBAC000497862 | Microbacterium schleiferi IFO 15075T Mycetocola miduiensis MD-T1-10-2T Arthrobacter bergerei CIP 108036T Arthrobacter nicotianae DSM 20123T Kocuria marina KMM 3905T Kocuria palustris DSM 11925T Kocuria rhizophila DSM 11926T | 99.69 99.50 99.93 99.78 99.86 99.85 99.08 | crowned crane Fresh water Fresh water Soil Gut of redcrowned crane Fresh water Soil Gut of korean | R2A R2A R2A TSA R2A MA BHIA | 25℃, 2d 20°C, 10d 30℃, 3d 25℃, 3d 20°C, 10d 26℃, 2d 37℃, 3d | |
| native cattle | |||||||||
| Nesterenkonia Zhihengliuella | UT 4-03 LPB0101 | NIBRBAC000498084 NIBRBAC000497981 | Nesterenkonia lacusekhoensis IFAM EL-30T Zhihengliuella flava H85-3T | 100 99.23 | Plant root Sea water | TSA MA | 30℃, 5d 26℃, 2d | ||
| Promicromonosporaceae Sanguibacteraceae | Cellulosimicrobium Promicromonospora Sanguibacter | KHC19 C6-16 IMCC25604 | NIBRBAC000497851 NIBRBAC000498031 NIBRBAC000497994 | Cellulosimicrobium funkei ATCC BAA-886T Promicromonospora flava CC 0387T Sanguibacter suarezii ST 26T | 99.86 99.16 99.86 | Gut of japanese crested ibis Natural cave Fresh water | R2A R2A 1/10 MA | 25℃, 3d 30℃, 3d 20°C, 10d | |
| Pseudonocardineae | Pseudonocardiaceae | Saccharopolyspora | KYW998 | NIBRBAC000497925 | Saccharopolyspora endophytica YIM 61095T | 99.86 | Sea water | MA | 25℃, 3d |
| Corynebacterineae | Corynebacteriaceae Dietziaceae Mycobacteriaceae | Corynebacterium Dietzia Mycobacterium | HKS28 Cip10 IMCC25613 C3-50 HKS22 C6-12 | NIBRBAC000498118 NIBRBAC000498060 NIBRBAC000498003 NIBRBAC000498028 NIBRBAC000498114 NIBRBAC000498030 | Corynebacterium freneyi ISPB 6695110T Corynebacterium marinum 7015T Dietzia timorensis ID 05-A0528T Mycobacterium alvei CIP 103464T Mycobacterium hodleri DSM 44183T Mycobacterium obuense ATCC 27023T | 99.63 99.85 99.50 99.29 99.72 99.44 | Ginseng cultivated soil Tidal flat Fresh water Natural cave Ginseng cultivated soil Natural cave | R2A MA R2A TSA R2A ISP2 | 30℃, 2d 30℃, 2d 20°C, 10d 30℃, 10d 30℃, 2d 30℃, 3d |
| Nocardiaceae | Rhodococcus | C10-13 C6-18 G1 KHO6 C1-60 | NIBRBAC000498035 NIBRBAC000498032 NIBRBAC000498066 NIBRBAC000497838 NIBRBAC000498022 | Mycobacterium senegalense CIP 104941T Mycobacterium sphagni DSM 44076T Rhodococcus cerastii C5T Rhodococcus fascians LMG 3623T Rhodococcus kronopolitis NEAU-ML 12T | 99.00 99.30 99.48 99.00 99.72 | agar Natural cave R2A Natural cave R2A Tidal flat R2A Gut of japanese NA crested ibis Natural cave TSA | 30℃, 7d 30℃, 16d 30℃, 2d 25℃, 3d 30℃, 3d | ||
| Streptomycineae | Streptomycetaceae | Williamsia Streptomyces | C3-42 C2-18 IMCC25607 BK1I29 MGS3Y-3-1 | NIBRBAC000498026 NIBRBAC000498023 NIBRBAC000497997 NIBRBAC000498091 NIBRBA0000114269 | Rhodococcus wratislaviensis NBRC 100605T Williamsia maris SJS 0289-JS1T Williamsia muralis MA 140/96T Streptomyces cocklensis BK 168T Streptomyces coelicoflavus NBRC 15399T | 99.50 99.71 100.00 98.96 100 | Natural cave Natural cave Fresh water Plant root Ginseng | ISP2 agar TSA R2A ISP2 MA | 30℃, 5d 30℃, 9d 20°C, 7d 30℃ 30℃, 3d |
| cultivated soil | |||||||||
| MGS3Y-3-4 HKS20 | NIBRBA0000114270 NIBRBAC000498113 | Streptomyces colombiensis NRRL B-1990T Streptomyces crystallinus NBRC 15401T | 100 99.24 | Ginseng cultivated soil Ginseng | MA R2A | 30℃, 3d 30℃, 1d | |||
| TW1K13 TW1K14 BBT-4 Tri-200-1 TW1K20 BBT-7 TW1M1 TW1K17 HKS13 MEC3Y-3-1 TW1S1 MMD3Y-3-3 | NIBRBAC000498097 NIBRBAC000498098 NIBRBA0000114215 NIBRBAC000498080 NIBRBAC000498099 NIBRBA0000114216 NIBRBAC000498100 NIBRBAC000498101 NIBRBAC000498112 NIBRBA0000114268 NIBRBAC000498102 NIBRBA0000114279 | Streptomyces cyslabdanicus K04-0144T Streptomyces griseoplanus NBRC 12779T Streptomyces kanamyceticus NBRC 13414T Streptomyces laculatispora BK 166T Streptomyces lannensis TA 4-8T Streptomyces lienomycini LMG 20091T Streptomyces lucensis NBRC 13056T Streptomyces mirabilis NBRC 13450T Streptomyces misakiensis NBRC 12891T Streptomyces prunicolor NBRC 13075T Streptomyces puniciscabiei S77T Streptomyces rishiriensis NBRC 13407T | 99.56 99.92 99.79 99.86 100 99.93 99.11 99.41 99.37 99.71 99.14 99.79 | cultivated soil Soil Soil Black biotite Soil Soil Black biotite Soil Soil Ginseng cultivated soil Ginseng cultivated soil Soil Ginseng cultivated soil | ISP2 ISP2 R2A R2A ISP2 R2A ISP2 ISP2 R2A MA ISP2 MA | 30℃, 7d 30℃, 7d 25℃, 2d 30℃, 2d 30℃, 7d 25℃, 2d 30℃, 7d 30℃, 7d 30℃, 1d 30℃, 3d 30℃, 7d 30℃, 3d | |||
| MK6Y-2-3 | NIBRBA0000114273 | Streptomyces turgidiscabies ATCC 700248 T | 99.16 | Ginseng cultivated soil | MA | 30℃, 3d | |||
Notes
Published as part of Kim, Mi-Sun, Lee, Ji-Hee, Kim, Seung-Bum, Cho, Jang-Cheon, Lee, Soon Dong, Joh, Ki-seong, Cha, Chang-Jun, Im, Wan-Taek, Bae, Jin-Woo, Jahng, Kwangyeop & Seong, Hana Yi and Chi-Nam, 2017, Unrecorded bacterial species belonging to the phylum Actinobacteria originated from Republic of Korea, pp. 27-28 in Journal of Species Research 6 (1) on page 27, DOI: 10.12651/JSR.2017.6.1.025, http://zenodo.org/record/12753566
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- Is part of
- Journal article: 10.12651/JSR.2017.6.1.025 (DOI)
- Journal article: urn:lsid:plazi.org:pub:FFB8FF8E9F6F14416D0E4F09FF85FFE8 (LSID)
- Journal article: http://publication.plazi.org/id/FFB8FF8E9F6F14416D0E4F09FF85FFE8 (URL)
- Journal article: http://zenodo.org/record/12753566 (URL)