Published December 31, 2017 | Version v1
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Unrecorded bacterial species belonging to the phylum Actinobacteria originated from Republic of Korea

  • 1. Department of Biology, Sunchon National University, Suncheon 57922, Republic of Korea
  • 2. Department of Microbiology, Chungnam National University, Daejeon 34134, Republic of Korea
  • 3. Department of Biological Sciences, Inha University, Incheon 22212, Republic of Korea
  • 4. Department of Science Education, Jeju National University, Jeju 63243, Republic of Korea
  • 5. Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Gyeonggi 17035, Republic of Korea
  • 6. Department of Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea
  • 7. Department of Biotechnology, Hankyong National University, Anseong 17579, Republic of Korea
  • 8. Department of Biology, Kyung Hee University, Seoul 02447, Republic of Korea
  • 9. Department of Life Sciences, Chonbuk National University, Jeonju 54896, Republic of Korea

Description

Kim, Mi-Sun, Lee, Ji-Hee, Kim, Seung-Bum, Cho, Jang-Cheon, Lee, Soon Dong, Joh, Ki-seong, Cha, Chang-Jun, Im, Wan-Taek, Bae, Jin-Woo, Jahng, Kwangyeop, Seong, Hana Yi and Chi-Nam (2017): Unrecorded bacterial species belonging to the phylum Actinobacteria originated from Republic of Korea. Journal of Species Research 6 (1): 25-41, DOI: 10.12651/JSR.2017.6.1.025

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References

  • Bressan, W. 2003. Biological control of maize seed pathogenic fungi by use of actinomycetes. Biocontrol 48(2): 233-240.
  • Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17(6): 368-376.
  • Felsenstein, J. 1985. Confidence limit on phylogenies: an approach using the bootstrap. Evolution 39(4):783-791.
  • Fitch, W.M. 1971. Toward defining the course of evolution: minimum change for a specific tree topology. Syst. Zool. 20(4):406-416.
  • Hall, T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41:95-98.
  • Jukes, T.H. and C.R. Cantor. 1969. Evolution of protein molecules. In: H.N. Munro (ed.), Mammalian Protein Metabolism, Academic Press, New York. pp. 21-132.
  • Kim, O.S., Y.J. Cho, K. Lee, S.H. Yoon, M. Kim, H. Na, S.C. Park, Y.S. Jeon, J.H. Lee, H. Yi, S. Won and J. Chun. 2012. Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int. J. Syst. Evol. Microbiol. 62(3):716-721.
  • Ludwig, W., J. Euzeby, P. Schumann, H.J. Busse, M.E. Trujillo, P. Kampfer and W.B. Whiteman. 2012. Road map of the phylum Actinobacteria. In: M. Goodfellow, P. Kampfer, H.J. Busse, M.E. Trujillo, K.I. Suzuki, W. Ludwig and W.B. Whitman (eds.), Bergey's manual of systematic bacteriology, vol 5, Springer-Verlag, New York. pp. 1-28.
  • Miao, V. and J. Davies. 2010. Actinobacteria: the good, the bad and the ugly. Antonie Van Leeuwenhoek 98(2):143- 150.
  • Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4(4):406-425.
  • Servin, J.A., C.W. Herbold, R.G. Skophammer and J.A. Lake. 2008. Evidence excluding the root of the tree of life from the actinobacteria. Mol. Biol. Evol. 25(1):1-4.
  • Tamura, K., G. Stecher, D. Peterson, A. Filipski, and S. Kumar. 2013. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol. Biol. Evol. 30(12):2725-2729.
  • Thompson, J.D., D.G. Higgins and T.J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22(22): 4673-4680.
  • Ventura, M., C. Canchaya, A. Tauch, G. Chandra, G.F. Fitzgerald, K.F. Chater and D. van Sinderen. 2007. Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum. Microbiol. Mol. Biol. Rev. 71(3): 495-548.