Published April 11, 2025 | Version v1
Journal article Open

Cross-species modeling of plant genomes at single nucleotide resolution using a pre-trained DNA language model

  • 1. ROR icon Cornell University

Description

These the zero-shot scores to estimate SNP effect with PlantCaduceus DNA language model (https://github.com/kuleshov-group/PlantCaduceus)

Files

Files (935.9 MB)

Name Size Download all
md5:d434521afe11ddc0cb7c09ca3700045a
323.9 MB Download
md5:1738f0b5c7d19ce243fd4f979052a43c
399.4 MB Download
md5:12627d2cb02b20b0c215243ba60b179f
212.5 MB Download

Additional details

Software

Repository URL
https://github.com/kuleshov-group/PlantCaduceus
Programming language
Python