Published March 31, 2025
| Version v6
Dataset
Open
ENCODE LR-RNA-seq models and expression values
Creators
Description
In this object are the following files:
- filt_ab_tpm_mouse.tsv / filt_ab_tpm_human.tsv: Expression levels in TPM for each transcript in human and mouse
- lr_mouse_library_data_summary.tsv / lr_human_library_data_summary.tsv: Metadata for each dataset in human and mouse
- cerberus.gtf / mouse_cerberus.gtf: Transcript models in GTF format
- human_ucsc_transcripts.gtf / mouse_ucsc_transcripts.gtf: Transcript models for transcripts that passed expression filtering (>= 1 TPM in at least one library; transcripts from known
- human_protein_summary.tsv / mouse_protein_summary.tsv: Summary of protein coding predictions, including ORF locations and NMD status
Files
Files
(5.8 GB)
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md5:7b384851d656ddee35fc54b7dd90829c
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md5:deb6ebd35c112fb32e07dbf64fd4325a
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md5:f413f61637e378d2081e6a43d0711763
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