SARS-CoV-2 mutational trajectories dataset
Creators
Description
This dataset contains mutation frequency data derived from in vitro evolution experiments of the SARS-CoV-2 spike receptor-binding domain (RBD), conducted under low-stringency (LSS) and high-stringency (HSS) selection pressures. The data capture position-specific mutation distributions and frequencies across multiple rounds of selection and across several RBD variants. These experiments were designed to assess how laboratory-driven evolution parallels the natural evolution of SARS-CoV-2, particularly in the context of ACE2 receptor binding—the critical first step in viral infection.
Files
per_residue_observed_codon_frequencies.zip
Files
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Additional details
Funding
- Ministry of Education Youth and Sports
- National Infrastructure for Biological and Medical Imaging LM2023050 Czech-BioImaging
- European Commission
- The National Institute of Virology and Bacteriology LX22NPO5103
- Czech Science Foundation
- Unveiling Divergence and Convergence Points in Coronavirus Evolution for Host Receptor Recognition 25-17643M
- Czech Science Foundation
- Institutional support of the Institute of Biotechnology RVO:86652036
Software
- Repository URL
- https://github.com/host-patho-evo/mutation_scatter_plot
- Programming language
- Python
- Development Status
- Active