Published April 14, 2025
| Version v1
Dataset
Open
HDMA ChromBPNet contribution scores - Part 3
Creators
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Liu, Betty B.1
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Jessa, Selin1
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Kim, Samuel H.1
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Ng, Yan Ting2
- Higashino, Soon Il1
- Marinov, Georgi K.1
- Chen, Derek C.1
- Parks, Benjamin E.1
- Li, Li1
- Nguyen, Tri C.1
- Wang, Austin T.1
- Wang, Sean K.1
- Tan, Serena Y.1
- Kosicki, Michael3
- Pennacchio, Len A.3
- Ben-David, Eyal2
- Pasca, Anca M.1
- Kundaje, Anshul1
- Farh, Kyle K.H.2
- Greenleaf, William J.1
- 1. Stanford University
- 2. Illumina AI Lab
- 3. Lawrence Berkeley National Laboratory
Description
Base-resolution contribution scores from ChromBPNet models (in the form of h5 files containing mean scores across folds per cell type), for HDMA (Liu*, Jessa*, Kim*, Ng* et al, bioRxiv 2025). A detailed description of the main data types deposited on Zenodo can be found here.
Files
Files
(47.5 GB)
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md5:cab7e23820db2a8e6fc4e89d2e4bcbbb
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1.6 GB | Download |
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md5:448cce1f52d35c485de6b798802d1f52
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md5:f323ec9bab1a32882cbb7cd863b298d3
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md5:ecead2bbadb80f2111d5b6a79c2c8a23
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md5:6636ecb315362644a07d3c457b9ae54e
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md5:14e1c665221411017bd76ae8bd6f354f
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md5:42c17ca958c210a24dfdf23b4d194cff
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md5:cf3485eefe4c57b7cffceb0fffd80e3c
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2.9 GB | Download |
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md5:0269000e4e8973a0c19d9deae5431e62
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3.8 GB | Download |
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md5:119dd2a132aafb52191069b04aa3e68a
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4.0 GB | Download |
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md5:750ff726095d10a4c3259f71f78f9c49
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3.3 GB | Download |
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md5:2621b591623446eedb1771f5f35fe0b6
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3.0 GB | Download |
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md5:50d3fc881b619f2367934b0b90b0029b
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5.0 GB | Download |
Additional details
Related works
- Is supplement to
- Preprint: 10.1101/2025.04.30.651381 (DOI)