Published March 21, 2025 | Version v1.0
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Precomputed data for NPLinker PODP run (NPLinker eScience workshop 2025)

  • 1. ROR icon Wageningen University & Research

Description

This data is required for the NPLinker eScience workshop 2025.

The upload contains precomputed data for a NPLinker (v2.0.0-alpha.8) run in PODP mode on the dataset available at: https://pairedomicsdata.bioinformatics.nl/projects/b78b5817-86e2-4e5e-a087-a6b0d9710fce.6


The following data directories are included:

    antismash: Contains precomputed AntiSMASH BGC results
    bigscape: Contains precomputed BiG-SCAPE results
    downloads: Contains a genome status file needed to correctly assign the BGCs to the stains


Make sure to place all files correctly in the project directory before starting the NPLinker PODP run. 
The directory structure should look like this:

nplinker_working_directory/
├── antismash/
├── bigscape/
└── downloads/

Files

README.txt

Files (2.9 GB)

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md5:286c187a5323aa8ca64af6f461a8bee6
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md5:54ff9890d7b81e9a25c8ab98e9fcf858
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Additional details