Deep Learning for Bioimage Analysis: Presentation & Workshop Materials – EPFL Open Microscopy 2025

This repository contains the presentation slides and workshop materials from the EPFL Open Microscopy & AI Workshop 2025 (conference website).

The materials include:

• Presentation slides covering deep learning applications in bioimage analysis following the AI4Life approach.
• Markdown guide for the hands-on workshop, detailing how to use deepImageJ for segmentation and SAMJ for annotation.
• Links to additional resources and tools to apply deep learning models in bioimage analysis.

The full workshop materials are also available on GitHub:
https://github.com/deepimagej/Workshop-materials/tree/main/OpenMicroscopyEPFL-2025

This upload ensures proper attribution and long-term accessibility of the material.