Published September 6, 2024 | Version v4
Dataset Open

De novo transcriptome assembly of the rockrose Helianthemum marifolium

Description

Illumina paired-end RNA sequences from leaves of 16 individuals of Helianthemum marifolium (four individuals from each of the four recognised taxonomic subspecies) were cleaned and assembled de novo using Trinity and Oases. EvidentialGene provides the curated assembled transcriptome containing 122002 transcripts, which are contained in the file Helianthemum_marifolium_transcriptome.fa.

The predicted peptide sequences obtained with TransDecoder are in the file Helianthemum_marifolium_fa_transdecoder.pep.

Gene ontology annotations from Trinotate are in the file Helianthemum_marifolium_trinotate_annotation.xls.

Files

README.txt

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Additional details

Funding

Ministerio de Ciencia, Innovación y Universidades
Proyectos de I+D+i PID2020-116355GB-I00