There is a newer version of the record available.

Published March 12, 2025 | Version v0.19.0
Software Open

shenwei356/taxonkit: TaxonKit v0.19.0

Creators

  • 1. Chongqing Medical University, China
  • 2. DOE Joint Genome Institute
  • 3. The GLOBE Institute – University of Copenhagen
  • 4. @imb-fmg

Description

Changes

  • TaxonKit v0.19.0
    • new command taxonkit reformat2: Reformat lineage in chosen ranks, allowing more ranks than 'reformat'
    • taxonkit reformat:
      • Fix -T/--trim which did not work for -r/--miss-rank-repl. #106

Please cite

Shen, W., Ren, H., TaxonKit: a practical and efficient NCBI Taxonomy toolkit, Journal of Genetics and Genomics, https://doi.org/10.1016/j.jgg.2021.03.006

Links

Tips

  • run taxonkit version to check update !!!
  • run taxonkit genautocomplete to update Bash completion !!!

OS |Arch |File, 中国镜像 |Download Count :------|:---------|:-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Linux |64-bit|taxonkit_linux_amd64.tar.gz,<br/> 中国镜像 | Linux |arm64 |taxonkit_linux_arm64.tar.gz,<br/> 中国镜像 | macOS |64-bit|taxonkit_darwin_amd64.tar.gz,<br/> 中国镜像 | macOS |arm64 |taxonkit_darwin_arm64.tar.gz,<br/> 中国镜像 | Windows|64-bit|taxonkit_windows_amd64.exe.tar.gz,<br/> 中国镜像|

Files

shenwei356/taxonkit-v0.19.0.zip

Files (1.6 MB)

Name Size Download all
md5:7ee84387bf14aa6f28a69752b83f3303
1.6 MB Preview Download

Additional details

Related works

Is supplement to
Software: https://github.com/shenwei356/taxonkit/tree/v0.19.0 (URL)

Software

Repository URL
https://github.com/shenwei356/taxonkit