Published February 18, 2025
| Version 1.9
Dataset
Open
geNomad database
Description
Marker database used by geNomad for virus and plasmid identification.
- genomad_db_v1.9.tar.gz: MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's MSL39.
- genomad_hmm_v1.9.tar.gz: HMMER HMM models.
- genomad_metadata_v1.9.tsv.gz: Metadata for all the 227,918 markers.
- genomad_msa_v1.9.tar.gz: Multiple sequence alignments in FASTA format.
Files
Files
(5.0 GB)
| Name | Size | Download all |
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md5:67244b528bb8bed464d1ca147136d33e
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842.0 MB | Download |
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md5:28f458c99326c486535f383ba7282d22
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3.5 GB | Download |
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md5:d4fa26b7a77017543bd80fb6bb4ee9d0
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7.1 MB | Download |
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md5:d6a391d2fd957a2a6496d8b638b0098a
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682.3 MB | Download |