LimeSeg Test Datasets

Image datasets from the publication : LimeSeg: A coarse-grained lipid membrane simulation for 3D image segmentation

• Vesicles.tif: spinning-disc confocal images of giant unilamellar vesicles
• HelaCell-FIBSEM.tif: a 3D Electron Microscopy (EM) dataset of nearly isotropic sections of a Hela cell, acquired with a focused ion beam scanning electron microscope (FIB-SEM). Sections are aligned with TrackEm2 (doi: ), without additional preprocessing.
• DrosophilaEggChamber.tif: point scanning confocal images of a Drosophila egg chamber. Channel 1: cell nuclei  stained with DAPI. Channel 2: cell membranes visualized with fused membrane proteins Nrg::GFP and Bsg::GFP. 

Image metadata contains extra information including voxel sizes.