Published December 23, 2024
| Version v2
Software
Open
Code supporting reproducible preprocessing and analysis of "Genomic alterations are associated with response to aromatase inhibitor therapy for ER-positive postmenopausal ductal carcinoma in situ: (CALGB 40903, Alliance)"
Creators
-
1.
Duke University School of Medicine
-
2.
Duke Cancer Institute
Description
Code supporting reproducible preprocessing and analysis of “Genomic alterations are associated with response to aromatase inhibitor therapy for ER-positive postmenopausal ductal carcinoma in situ: (CALGB 40903, Alliance)” submitted for publication in Breast Cancer Research. Includes definition files for supporting Apptainer software containers.
Files
calgb40903-dce19682.zip
Files
(8.9 MB)
| Name | Size | Download all |
|---|---|---|
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md5:d829415aaeb1de59b954634f3976a75a
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8.9 MB | Preview Download |
Additional details
Funding
- National Cancer Institute
- U10CA180821
- National Cancer Institute
- U10CA180882
- National Cancer Institute
- U24CA196171
- National Cancer Institute
- UG1CA232760
- National Cancer Institute
- UG1CA233253
- Breast Cancer Research Foundation
- North Carolina Biotechnology Center
- HARDAC+: Reproducible HPC for Next-generation Genomics 2016-IDG-1013
- North Carolina Biotechnology Center
- HARDAC-M: Enabling memory-intensive computation for genomics 2020-IIG-2109
- National Cancer Institute
- UG1CA233329
Software
- Repository URL
- https://gitlab.oit.duke.edu/dcibioinformatics/pubs/calgb40903
- Programming language
- R, Python, Nextflow, Singularity