Published November 24, 2024 | Version v1
Dataset Open

MetaVision3D: Automated Framework for the Generation of Spatial Metabolome Atlas in 3D | MALDI Data

Authors/Creators

  • 1. ROR icon University of Florida

Contributors

Project leader:

  • 1. ROR icon University of Florida

Description

This repository contains MALDI data related to the Ma et al. study "MetaVision3D: Automated Framework for the Generation of Spatial Metabolome Atlas in 3D". Processed MALDI pixel-by-pixel .csv files for both metabolomics and lipidomics for two Wild-type samples, one 5xFAD sample and one GAA sample. If you use this dataset in your research, please consider citing the above study.

The content of the files are:
wt.zip - pixel-by-pixel .csv files of metabolomics and lipidomics for wild-type sample.

5x.zip - pixel-by-pixel .csv files of metabolomics and lipidomics for 5xFAD sample.

gaa.zip - pixel-by-pixel .csv files of metabolomics and lipidomics for GAA sample.

wt2.zip - pixel-by-pixel .csv files of metabolomics and lipidomics for wild-type2 sample.

Files

5x.zip

Files (3.4 GB)

Name Size Download all
md5:bf69f4935a8b275011ceeb3b61e3a449
1.1 GB Preview Download
md5:024552d162d74c088b768e1a2c9f5429
1.1 GB Preview Download
md5:30fc52f7e4e3a0180e8a5ca822833e6d
1.0 GB Preview Download
md5:e1f58a1df214453ecefa35efa74a66c5
114.6 MB Preview Download

Additional details

Related works

Is supplement to
10.1101/2023.11.27.568931 (DOI)

Software

Repository URL
https://github.com/XinBiostats/MetaVision3D
Programming language
Python