Published November 16, 2024 | Version v1
Dataset Open

Data repository for the 2021 AAPM deep-learning sparse-view CT grand challenge

Creators

Contributors

Project leader:

  • 1. ROR icon American Association of Physicists in Medicine

Description

The training data for developing the neural networks for DL sparse-view CT are contained in this repository.
All files are compressed with gzip in order to facilate faster downloads.
Data are partitioned into four batches, which also facilates downloading of the
individual files. Data are in python numpy's .npy format.
After uncompressing with gunzip the .npy files can be read into python
with the numpy.load command, yielding single precision floating point arrays
of the proper dimensions.

Description of data files:
Phantom_batch?.npy
These arrays are 1000x512x512.
1000 images of pixel dimensions 512x512.
These are the true images.

FBP128_batch?.npy
These arrays are 1000x512x512.
1000 images of pixel dimensions 512x512.
These are the FBP reconstructed images from the 128-view sinograms.

Sinogram_batch?.npy
These arrays are 1000x128x1024.
1000 sinograms of 128 projections over 360 degree scanning onto a 1024-pixel linear detector. 

There are four batches. Thus 4000 sets of data/image pairs are available for training
the neural networks for image reconstruction.
The goal is to train a network that accepts the FBP128 image (and/or the 128-view sinogram)
to yield an image that is as close as possible to the corresponding Phantom image.

 

The python code metric_script.py was used to score the submissions to DL sparse-view CT.

 

Challenge report is published in Medical Phyiscs:

Sidky EY, Pan X. Report on the AAPM deep-learning sparse-view CT grand challenge. Med Phys. 2022; 49: 49354943.

See link below in Related Works.

 

Files

Files (5.0 GB)

Name Size Download all
md5:5eb260db545d26fe896fd25fbe27e979
707.5 MB Download
md5:529887021c1eec92b7bda9ffdde03115
707.6 MB Download
md5:afc59d1c37b6735b34ea6a9f75309cd8
707.7 MB Download
md5:c3a231eb6299f0fdce0e5401aea60e83
707.6 MB Download
md5:53421ad0f0825d068995c5bf2e87c4eb
1.6 kB Download
md5:df49b0d12afb69459015b3e253ff760a
138.2 MB Download
md5:0bcd5b481dfc881c5edce2346cb38138
138.7 MB Download
md5:64b9b5cd083fe5fea5ed7244c304ebce
140.1 MB Download
md5:729d61003231e3249b3e77b13af4df61
138.5 MB Download
md5:d9e26f7506544095097dd3c7944c3c6a
414.3 MB Download
md5:cae22eed889b92112152575919884a1b
414.3 MB Download
md5:43242d958a9793a710b615abd466c26d
414.3 MB Download
md5:45e779db07306e9c22448a88715ced8d
414.3 MB Download

Additional details

Related works

Is supplement to
Journal article: 10.1002/mp.15489 (DOI)

Funding

Advanced iterative image reconstruction for digital breast tomosynthesis - Resubmission 01 1R01EB026282-01A1
National Institutes of Health
Spectral CT metal artifact correction 1R01EB023968-01A1
National Institutes of Health