Published November 12, 2024
| Version v1
Dataset
Open
Characterization of tumour heterogeneity through segmentation-free representation learning on multiplexed imaging data
Description
This is the data repository for Characterization of tumour heterogeneity through segmentation-free representation learning on multiplexed imaging data.
Catalog:
- Intermediate data used in plotting: CANVAS_source_data.zip
- Single cell monocyte data: monocyte.h5ad
- qPCR table: qPCR_1013.csv
- NanoString GeoMx cell composition: fig6b.csv
- Pretrained CANVAS model: checkpoint-1999.pth
The source IMC data is avaiable at: https://zenodo.org/records/7760826
Files
CANVAS_source_data.zip
Files
(4.8 GB)
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md5:29e2b4b0c868db118858d4c88c54e2a3
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753.9 MB | Preview Download |
md5:66616dd844829723e51df9537eaa46a1
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4.0 GB | Download |