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Published September 6, 2018 | Version v0.12.0
Software Open

pybel/pybel v0.12.0

Authors/Creators

  • 1. Fraunhofer SCAI
  • 2. Harvard Medical School
  • 3. @TGAC

Description

Changed
  • Update edge hashing algorithm (this invalidates old hashes)
  • Edge hashes are now used as keys instead of being put inside edge data dictionaries
  • Improved graph operations with new location of edge hashes
  • Update Node/Link JSON schema
  • Improve contains and has_node functions to handle DSL objects
  • Require usage of DSL when creating BELGraph instances
  • Use DSL completely in ORM
  • Add SHA512 to authors to avoid issues with MySQL's collation
Removed
  • Remove pybel.tokens.node_to_tuple function and pybel.tokens.node_to_bel functions
  • All tuple-related functions in the DSL (AKA the tupleectomy)

Files

pybel/pybel-v0.12.0.zip

Files (451.2 kB)

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Additional details

Related works

Is supplement to
https://github.com/pybel/pybel/tree/v0.12.0 (URL)