Published October 28, 2024
| Version v2
Dataset
Open
PanTheraDB
Description
This database contains the predictions of synergy scores between triplets of more than 100 drugs treating the cell-lines from the NCI60.
Columns:
NSC1: The NSC of the first drug found in the triplet
NSC2: The NSC of the second drug found in the triplet
NSC3: The NSC of the third drug found in the triplet
CELL_NAME: The name of the treated cell-line
Bliss: The synergy score (ComboScore_{1 /to 3} defined by MEAN(PREDICTED - EXPECTED_BLISS) using the best performing model. Where EXPECTED_BLISS uses the multiplicative survival principle based on the individual dose-responses against each drug in the triplet and MEAN represents the average over the different combinations of concentrations.
Multi: The synergy score (ComboScore_{2 /to 3} defined by MEAN(PREDICTED - EXPECTED_MULTI) using the best performing model. Where EXPECTED_MULTI is defined as the minimum over the three possible pair-single drug combinations in the triplet, using the multiplicative survival principle.
{synergy}_q{XX}: Quantile XX for the synergy aggregated over an ensemble containing 10 models
Files
TreatDB.csv
Files
(2.2 GB)
Name | Size | Download all |
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md5:b0b1198d0df839cd70fdda968e0ae619
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Additional details
Software
- Repository URL
- https://github.com/alonsocampana/treatnet
- Programming language
- Python