Increased spatial coupling of integrin and collagen IV in the immunoresistant clear-cell renal-cell carcinoma tumor microenvironment - R Code

R code to process, annotate, and analyze Nanostring's CosMx SMI data and multiplex immunofluorescence data associated with:

Soupir, A. C. et al. Increased spatial coupling of integrin and collagen IV in the immunoresistant clear cell renal cell carcinoma tumor microenvironment. bioRxiv, 2023.2011.2016.567457 (2023). https://doi.org:10.1101/2023.11.16.567457