Dataset and R script - Non-linear transcriptomic responses to compounded environmental changes across temperature and resources in a pest beetle, Callosobruchus maculatus
Authors/Creators
Description
This dataset contains data and R script for analysis on life history and transcriptomic responses to single dimensional changes in resource (chickpea-27°C) and temperature (cowpea-35°C) and multi-dimensional environmental changes in resource and temperature (chickpea-35°C) in a pest beetle, Callosobruchus maculatus (control treatment = cowpea-27°C). Dataset contains life history data collected in laboratory conditions (tab 1), logFC data (RNA-sequencing; Novogene Co. Ltd.) for Spearman rank correlation tests between treatments (tabs 2-4), read count data (RNA-sequencing; Novogene Co. Ltd.) for differential expression analysis using edgeR (R1-5 = Four samples at cowpea-27°C; R7-12 = Four samples at cowpea-35°C; R13-17 = Four samples at chickpea-27°C; R25-28 = Four samples at chickpea-35°C; tab 5) and edgeR output data for plotting in R (tab 6).
Files
Files
(3.5 MB)
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md5:26c7e7b4ad978c014ab1f13baa2529d6
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md5:1c6c1ed1beb2a804f32d1aa614226d32
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Additional details
Funding
- Biotechnology and Biological Sciences Research Council
- EASTBIO DTP BB/M010996/1