Published September 16, 2024
| Version v2.1
Software
Open
ErlendNilsen/OpenPop_Integrated_DistSamp: Ptarmigan IDSM v2.1
Creators
- 1. Norwegian Institute for Nature Research
- 2. @NINAnor
Description
This release includes a range of changes and extension to multi-area workflows and documentation:
- An additional workflow setup that is invoked from terminal and uses Nix shell and GNUparallel
- Vignettes documenting multi-area and simulated data workflows with R/targets and Nix/GNUparallel
- A slightly altered model structure that uses first-year recruitment rate to parameterise initial juvenile densities
- Summarising of density across line transects within model to reduce memory load of the output
- A new definition-time if-else that allows leaving out telemetry data
- New function for calculating and visualizing sampling correlations between survival and recruitment
- New function for calculating and visualizing two measures of generation time
- Several updates to existing plotting functions
Single-area workflows can be run analogous to the multi-area workflows. The simulated data workflows are still functional, but they rely on the original setup from the v1.5 release.
Files
ErlendNilsen/OpenPop_Integrated_DistSamp-v2.1.zip
Files
(1.8 MB)
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Additional details
Related works
- Is supplement to
- Software: https://github.com/ErlendNilsen/OpenPop_Integrated_DistSamp/tree/v2.1 (URL)