Published August 18, 2017
| Version v1
Journal article
Restricted
Halamphora oceanica (Catenulaceae, Bacillariophyta), a new species from the epipelagic region of the southwestern Gulf of Mexico
Authors/Creators
- 1. Laboratorio de Toxicología Ambiental, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Av. Wilfrido Massieu s/n, Unidad Profesional Zacatenco, CP 07738, Ciudad de México, México
- 2. Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México, Apartado Postal 70-367, Circuito Exterior s/n, Ciudad Universitaria, 04510, Ciudad de México, México
- 3. Laboratorio de Toxicología Ambiental, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Av. Wilfrido Massieu s/n, Unidad Profesional Zacatenco, CP 07738, Ciudad de México, México & Dirección de Investigación en Transformación de Hidrocarburos, Instituto Mexicano del Petróleo, EJe Central Lázaro Cárdenas Norte 152, San Bartolo Atepehuacan, CP 07730, Ciudad de México, México
Description
Olivares-Rubio, Hugo F., Cabrera, Lidia I., Godínez-Ortega, José Luis, Salazar-Coria, Lucía, Vega-López, Armando (2017): Halamphora oceanica (Catenulaceae, Bacillariophyta), a new species from the epipelagic region of the southwestern Gulf of Mexico. Phytotaxa 317 (3): 188-198, DOI: 10.11646/phytotaxa.317.3.3, URL: http://dx.doi.org/10.11646/phytotaxa.317.3.3
Files
Linked records
Additional details
Identifiers
- LSID
- urn:lsid:plazi.org:pub:A51BFFDD8064FFCB4C027A73FF8CCB51
References
- Anagnostidis, K. (2001) Nomenclatural changes in cyanoprokaryotic order Oscillatoriales. Preslia, Praha 73: 359-375.
- Archibald, R.E.M. & Schoeman, F.R. (1984) Amphora coffeaeformis (C.A. Agardh) Kutzing: a revision of the species under light and electron microscopy. South African Journal of Botany 3: 83-102. https://doi.org/10.1016/S0022-4618(16)30061-4
- Cavalier-Smith, T. (2015) 7 Division Heterokontophyta / Ochrophyta. In: Frey, W. (Ed.) Syllabus of Plant Families. Adolf Engler´s Syllabus der Pflanzenfamilien. 13th edition. Borntraeger Science Publishers, Stuttgart, pp. 61-176.
- Doyle, J.J. & Doyle, J.L. (1987) A rapid DNA isolation procedure from small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11-15.
- Gouy, M., Guindon, S. & Gascuel, O. (2010) SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Molecular Biology and Evolution 27 (2): 221-224. https://doi.org/10.1093/molbev/msp259
- Guillard, R.R.L. (1975) Culture of phytoplankton for feeding marine invertebrates. In: Smith, W.L. & Chanley, M.H. (Eds.) Culture of Marine Invertebrate Animals. Plenum Press, New York, pp. 26-60. https://doi.org/10.1007/978-1-4615-8714-9_3
- Guiry, M.D. & Guiry, G.M. (2017) AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. Available from: http://www.algaebase.org (accessed 27 February 2017)
- Hall, B.G. (2013) Building phylogenetic trees from molecular data with MEGA. Molecular Biology and Evolution 30 (5): 1229-1235. https://doi.org/10.1093/molbev/mst012
- Hassall, A.H. (1850) A microscopic examination of the water supplied to the inhabitants of London and the suburban districts. Samuel Highley, 32, Fleet Street, London, pp. 1-66.
- Jiang, H.Y., Hu, C.Q., Yang, H.P., Zhang, L.P., Peng, P.F., Luo, P., Zhao, Z. & Xia, J.J. (2015) Morphology and phylogeny of Halamphora yongxingensis sp. nov. (Bacillariophyta), a new marine benthic diatom isolated from Yongxing Island, South China Sea. Phytotaxa 195 (1): 53-64. https://doi.org/10.11646/phytotaxa.195.1.3
- Krayesky, D.M., Meave del Castillo, E., Zamudio, E., Norris, J.N. & Frederique, S. (2009) Diatoms (Bacillariophyta) of the Gulf of Mexico. In: Tunnel, J.W. Jr., Felder, D.L. & Earl, S.A. (Eds.) Gulf of Mexico origin, waters, and biota. Vol. 1. Biodiversity. Harte Research Institute for Gulf of Mexico Studies Series, Texas A&M University Press, Corpus Christi, pp. 155-186.
- Kreader, C.A. (1996) Relief of amplification inhibition in PCR with bovine serum albumin or T4 gene 32 protein.Applied and Environmental Microbiology 62 (3): 1102-1106.Available from: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC167874/pdf/621102.pdf (accessed 1 August 2017)
- Kumar, S., Stecher, G. & Tamura, K. (2016) MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution 33 (7): 1870-1874. https://doi.org/10.1093/molbev/msw054
- Lauder, H.S. (1864) Remarks on the marine Diatomaceae found at Hong Kong, with descriptions of new species. Transactions of the Microscopical Society of London, New Series 12: 75-79. https://doi.org/10.1111/j.1365-2818.1864.tb01628.x
- Levkov, Z. (2009) Amphora sensu lato. In: Lange-Bertalot, H. (Ed.) Diatoms of Europe. Diatoms of the European inland waters and comparable habitats 5. A.R.G. Gantner Verlag, Ruggel, 918 pp.
- Meunier, A. (1910) Microplancton des Mers de Barents et de Kara. Duc d'Orleans, Campagne Arctique de 1907: 1-355.
- Ostenfeld, C.H. & Schmidt, J. (1902) Plankton fra det Rode Hav og Adenbugten (Plankton from the Red Sea and the Gulf of Aden.). Videnskabelige Meddelelser fra Dansk Naturhistorisk Forening i KJObenhavn 6 (3): 141-182.
- Pniewski, F., Friedl, T. & Latala, A. (2010) Identification of diatom isolates from the Gulf of Gdansk: testing of species identifications using morphology, 18S rDNA sequencing and DNA barcodes of strains from the Culture Collection of Baltic Algae (CCBA). Oceanological and Hydrobiological Studies 39 (3): 3-20. https://doi.org/10.2478/v10009-010-0031-7
- Rabenhorst, L. (1853) Die Susswasser-Diatomaceen (Bacillarien.): fur Freunde der Mikroskopie. Eduard Kummer, Leipzig, pp. 1-72. https://doi.org/10.5962/bhl.title.8348
- Ricard, M. (1987) Atlas du Phytoplankton Marin. Vol. 2. Diatomophycees. Editions du Centre National de la Recherche Scientifique, Paris, pp. 1-297.
- Rochin-Banaga, H., Siqueiros-Beltrones, D.A. & Bollmann, J. (2015) Benthic diatoms from shallow environments deposited at 300 m depth in a southern Gulf of California basin. CICIMAR Oceanides 30 (1): 71-76. Available from: http://oceanides.ipn.mx/index. php/cicimaroceanides/article/view/145/154 (accessed 1 August 2017)
- Sala, S.E., Sar, E.A. & Ferrario, M.E. (1998) Review of materials reported as containing Amphora coffeaeformis (Agardh) Kutzing in Argentina. Diatom Research 13 (2): 323-336. https://doi.org/10.1080/0269249X.1998.9705454
- Sato, S., Tamotsu, N. & Mann, D.G. (2013) Morphology and life history of Amphora commutata (Bacillariophyta) I: the vegetative cell and phylogenetic position. Phycologia 52 (3): 225-238. https://doi.org/10.2216/12-072.1
- Spaulding, S.A., Lubinski, D.J. & Potapova, M. (2010) Diatoms of the United States. Available from: http://westerndiatoms.colorado.edu (accessed 27 February 2017)
- Stepanek, J.G. & Kociolek, J.P. (2013) Several new species of Amphora and Halamphora from the western USA. Diatom Research 28 (1): 61-76. https://doi.org/10.1080/0269249X.2012.735205
- Stepanek, J.G. & Kociolek, J.P. (2014) Molecular phylogeny of Amphora sensu lato (Bacillariophyta): an investigation into the monophyly and classification of the amphoroid diatoms. Protist 165 (2): 177-195. https://doi.org/10.1016/j.protis.2014.02.002
- Wachnicka, A.H. & Gaiser, E.E. (2007) Characterization of Amphora and Seminavis from south Florida, USA. Diatom Research 22 (2): 387-455. https://doi.org/10.1080/0269249X.2007.9705722
- Wang, P., Park, B.S., Kim, J.H., Kim, J.H., Lee, H.O. & Han, M.S. (2014) Phylogenetic position of eight Amphora sensu lato (Bacillariophyceae) species and comparative analysis of morphological characteristics. Algae 29 (2): 57-73. https://doi.org/10.4490/algae.2014.29.2.057
- Witkowski, A., Lange-Bertalot, H. & Metzeltin, D. (2000) Diatom flora of marine coasts I. Iconographia Diatomologica 7: 1-925, 219 pls.