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Published September 5, 2024 | Version v1.0.15
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peterjc/thapbi-pict: THAPBI PICT v1.0.15

Authors/Creators

  • 1. The James Hutton Institute
  • 2. University of Strathclyde
  • 3. University of St Andrews

Description

Released on PyPI 2024-09-05:

https://pypi.org/project/thapbi-pict/1.0.15/

Updated the default ITS1 database with additional curated entries, many from Jung et al. (2024), and the NCBI taxonomy as of August 2024. See:

Jung et al. (2024) Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity https://doi.org/10.3114/sim.2024.107.04

This included renaming our placeholder Phytophthora taxon ad7988a to Phytophthora sp. taxon castitis as per KC478759:

Bertier et al. (2013) The expansion of Phytophthora clade 8b: three new species associated with winter grown vegetable crops https://doi.org/10.3767%2F003158513X668554

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Additional details

Related works

Is supplement to
Software: https://github.com/peterjc/thapbi-pict/tree/v1.0.15 (URL)