Published March 30, 2016
| Version v1
Journal article
Restricted
Cryptosporella platyphylla, a new species associated with Betula platyphylla in China
- 1. The Key Laboratory for Silviculture and Conservation of Ministry of Education, Beijing Forestry University, Beijing 100083, China
- 2. Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand
- 3. Museum of Beijing Forestry University, Beijing 100083, China
- 4. Beijing Municipal Forestry Protection Station, Beijing 100029, China
Description
Fan, Xin-Lei, Du, Zhuo, Hyde, Kevin D., Liang, Ying-Mei, Pan, Yan-Piing, Tian, Cheng-Ming (2016): Cryptosporella platyphylla, a new species associated with Betula platyphylla in China. Phytotaxa 253 (4): 285-292, DOI: 10.11646/phytotaxa.253.4.4, URL: http://dx.doi.org/10.11646/phytotaxa.253.4.4
Files
Restricted
The record is publicly accessible, but files are restricted to users with access.
Linked records
Oops! Something went wrong while fetching results.
Additional details
Identifiers
- LSID
- urn:lsid:plazi.org:pub:1746F80DFF8CFFC2FF86FFB0715FD005
- URL
- http://publication.plazi.org/id/1746F80DFF8CFFC2FF86FFB0715FD005
References
- Barr, M.E. (1978) The Diaporthales in North America with emphasis on Gnomonia and its segregates. Mycologia Memoir 7: 1-232.
- Carbone, I. & Kohn, L.M. (1999) A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91: 553-556. http://dx.doi.org/10.2307/3761358
- Castlebury, L.A., Rossman, A.Y., Jaklitsch, W.J. & Vasilyeva, L.N. (2002) A preliminary overview of the Diaporthales based on large subunit nuclear ribosomal DNA sequences. Mycologia 94: 1017-1031. http://dx.doi.org/10.2307/3761867
- Chomnunti, P., Hongsanan, S., Aguirre-Hudson, B., Tian, Q., Persoh, D., Dhami, M.K., Alias, A.S., Xu, J.C., Liu, X., Stadler, M., Hyde, K.D. (2014) The sooty moulds. Fungal Diversity 66: 1-6. http://dx.doi.org/10.1007/s13225-014-0278-5
- Crous, P.W., Gams, W., Stalpers, J.A., Robert, V. & Stegehuis, G. (2004) MycoBank: an online initiative to launch mycology into the 21st century. Studies in Mycology 50: 19-22.
- Doyle, J.J. & Doyle, J.L. (1990) Isolation of plant DNA from fresh tissue. Focus 12: 13-15.
- Fan, X.L., Hyde, K.D., Liu, M., Liang, Y.M. & Tian, C.M. (2015) Cytospora species associated with walnut canker disease in China, with description of a new species C. gigalocus. Fungal Biology 119: 310-319. http://dx.doi.org/10.1016/j.funbio.2014.12.011
- Guindon, S., Dufayard, J.F., Lefort, V., Anisimova, M., Hordijk, W. & Gascuel, O. (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology 59: 307-321. http://dx.doi.org/10.1093/sysbio/syq010
- Glass, N.L. & Donaldson, G.C. (1995) Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Applied and Environmental Microbiology 61: 1323-1330.
- Hillis, D.M. & Bull, J.J. (1993) An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Systematic Biology 42: 182-192. http://dx.doi.org/10.1093/sysbio/42.2.182
- Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, D.J., Buyck, B., Cai, L., Dai, Y.C., Abd-Elsalam, K.A., Ertz, D., Hidayat, I., Jeewon, R., Jones, E.B.G., Bahkali, A.H., Karunarathna, S.C., Liu, J.K., Luangsa-ard, J.J., Lumbsch, H.T., Maharachchikumbura, S.S.N., McKenzie, E.H.C., Moncalvo, J.M., Ghobad-Nejhad, M., Nilsson, H., Pang, K.L., Pereira, O.L., Phillips, A.J.L., Raspe, O., Rollins, A.W., Romero, A.I., Etayo, J., Selcuk, F., Stephenson, S.L., Suetrong, S., Taylor, J.E., Tsui, C.K.M., Vizzini, A., Abdel-Wahab, M.A., Wen, T.C., Boonmee, S., Dai, D.Q., Daranagama, D.A., Dissanayake, A.J., Ekanayaka, A.H., Fryar, S.C., Hongsanan, S., Jayawardena, R.S., Li, W.J., Perera, R.H., Phookamsak, R., de Silva, N.I., Thambugala, K.M., Tian, Q., Wijayawardene, N.N., Zhao, R.L., Zhao, Q., Kang, J.C. & Promputtha, I. (2015) The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts. Fungal Diversity 74: 3-18. http://dx.doi.org/10.1007/s13225-015-0351-8
- Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30: 772-780. http://dx.doi.org/10.1093/molbev/mst010
- Kobayashi, T. (1970) Taxonomic studies of Japanese Diaporthaceae with special reference to their life-histories. Tokyo, Japan.
- Maharachchikumbura, S.S.N., Hyde, K.D., Jones, E.B.G., McKenzie, E.H.C., Huang, S.K., Abdel-Wahab, M.A., Daranagama, D.A., Dayarathne, M.C., D' souza, M.J., Goonasekara, I.D., Hongsanan, S., Jayawardena, R.S., Kirk, P.M., Konta, S., Liu, J.K., Liu, Z.Y., Norphanphoun, C., Pang, K.L., Perera, R.H., Senanayake, I.C., Shang, Q.J., Shenoy, B.D., Xiao, Y., Bahkali, A.H., Kang, J., Somrothipol, S., Suetrong, S., Wen, T. & Xu, J.C. (2015) Towards a natural classification and backbone tree for Sordariomycetes. Fungal Diversity 72: 199-301. http://dx.doi.org/10.1007/s13225-015-0331-z
- Mejia, L.C., Castlebury, L.A., Rossman, A.Y., Sogonov, M.V. & White, J.F. (2008) Phylogenetic placement and taxonomic review of the genus Cryptosporella and its synonyms Ophiovalsa and Winterella (Gnomoniaceae, Diaporthales). Mycological Research 112: 23-35. http://dx.doi.org/10.1016/j.mycres.2007.03.021
- Mejia, L.C., Rossman, A.Y., Castlebury, L.A. & White, J.F. (2011) New species, phylogeny, host-associations and geographic distribution of genus Cryptosporella (Gnomoniaceae, Diaporthales). Mycologia 103: 379-399. http://dx.doi.org/10.3852/10-134
- Posada, D. & Crandall, K.A. (1998) Modeltest: Testing the model of DNA substitution. Bioinformatics 14: 817-818. http://dx.doi.org/10.1093/bioinformatics/14.9.817
- Rannala, B. & Yang, Z. (1996) Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. Journal of Molecular Evolution 43: 304-311. http://dx.doi.org/10.1007/BF02338839
- Ronquist, F. & Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572- 1574. http://dx.doi.org/10.1093/bioinformatics/btg180
- Rossman, A.Y., Farr, D.F. & Castlebury, L.A. (2007) A review of the phylogeny and biology of the Diaporthales. Mycoscience 48: 135- 144. http://dx.doi.org/10.1007/S10267-007-0347-7
- Saccardo, P.A. (1877) Commentarium mycologicum fungos in primis italicos illustrans. Michelia 1: 30.
- Sogonov, M.V., Castlebury, L.A., Rossman, A.Y., Mejia, L.C. & White, J.F. (2008) Leaf-inhabiting genera of the Gnomoniaceae, Diaporthales. Studies in Mycology 62: 1-77. http://dx.doi.org/10.3114/sim.2008.62.01
- Swofford, D.L. (2003) PAUP*: Phylogenetic Analysis Using Parsimony, * and Other Methods, Version 4.0b10. Sinauer Associates, Sunderland.
- White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications 18: 315-322. http://dx.doi.org/10.1016/b978-0-12-372180-8.50042-1
- Zhuang, W.Y. (2005) Fungi of northwestern China, New York, USA.