Published August 29, 2024
| Version v3.2.0
Software
Open
CDDLeiden/QSPRpred: Version 3.2.0
Creators
- 1. Leiden University
- 2. Netcompany
Description
Change Log
From v3.1.1 to v3.2.0
Fixes
- Fixed a bug in
ChempropModel
that caused it not to work with missing values in the target column.
Changes
calibration_score
is now implemented under theMetric
class asCalibrationScore
.
New Features
- Added a range of new
metrics:
BEDROC
,EnrichmentFactor
,RobustInitialEnhancement
,Prevalence
,Sensitivity
,Specificity
,PositivePredictivity
,NegativePredictivity
,CohenKappa
,BalancedPositivePredictivity
,BalancedNegativePredictivity
,BalancedMatthewsCorrcoeff
,BalancedCohenKappa
,KSlope
,R20
,KPrimeSlope
,RPrime20
,Pearson
,Spearman
,Kendall
,AverageFoldError
,AbsoluteAverageFoldError
,PercentageWithinFoldError
- Added
MaskedMetric
which can be wrapped around any metric to mask datapoints when a target value is missing. - Added a tutorial on model and data serialization.
ApplicabilityDomain
now has atransform
method that can be used to transform a dataset to a continuous applicability domain score, such as the distance to the nearest neighbor in the training set (an example was added to the tutorials).
Removed Features
None.
Files
CDDLeiden/QSPRpred-v3.2.0.zip
Files
(3.8 MB)
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Additional details
Related works
- Is supplement to
- Software: https://github.com/CDDLeiden/QSPRpred/tree/v3.2.0 (URL)