Published October 27, 2022
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Phylogeography reveals a panmictic population of the Chilean nylon shrimp along its exploitation range in the southeast Pacific Ocean
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Haye, Pilar A., Segovia, Nicolás I., Vera, Raúl, Acuña, Enzo (2023): Phylogeography reveals a panmictic population of the Chilean nylon shrimp along its exploitation range in the southeast Pacific Ocean. Organisms Diversity & Evolution (New York, N.Y.) 23 (1): 125-138, DOI: 10.1007/s13127-022-00589-1, URL: http://dx.doi.org/10.1007/s13127-022-00589-1
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References
- Acuna, E., Alarcon, R., Arancibia, H., Barros, M., Cid, L., Cortes, A., Cubillos, L., & Pineda, J. (2009). Evaluacion directa de camaron nailon entre la II y VIII Regiones, ano 2008, FIP Nº 2008-17. Final Report FIP 2008-17 (p. 274). Retrieved October 15, 2020, from https://www.subpesca.cl/fipa/613/w3-article-89228.html
- Acuna, E., Alarcon, R., Arancibia, H., Cid, L., Cortes, A., & Cubillos, L. (2012). Evaluacion directa de camaron nailon entre la II y VIII regiones, ano 2009. Final Report FIP 2009-16 (p. 279). Retrieved October 15, 2020, fromhttps://www.subpesca.cl/fipa/613/w3-article- 89282.html
- Acuna, E., Alarcon, R., Cortes, A., Arancibia, H., Haye, P. A, Segovia, N., & Petitgas, P. (2019). Evaluacion directa de camaron nailon entre la II y VIII Regiones, ano 2018. Final Report IFOP 2018- 2019 (p. 296). Retrieved September 20, 2020, from https:// www. ifop.cl/wp-content/contenidos/uploads/RepositorioIfop/ Inf ormeF inal/2019/P-682058.pdf
- Acuna, E., Arancibia, H., Roa, R., Alarcon, R., Diaz, C., Mujica, A., Winkler, F. Lepez, I., & Cid, L. (1997). Analisis de la pesqueria y evaluacion indirecta del stock de camaron nailon (II a VIII regiones). Final Report FIP-IT 95-06 (p. 186). Retrieved September 20, 2020, from https://www.subpesca.cl/fipa/613/w3- ar ticle-89510.html
- Acuna, E., Gonzalez, M. T., & Gonzalez, M. (2003). Pesquerias de langostinos y camaron nailon en el Norte de Chile, 263-287. In E. Yanez (Ed.), Actividad Pesquera y de Acuicultura en Chile. Pontificia Universidad Catolica de Valparaiso. Escuela de Ciencias del Mar.
- Alam, M. M., Westfall, K. M., & Palsson, S. (2015). Mitochondrial DNA variation reveals cryptic species in Fenneropenaeus indicus. Bulletin of Marine Science, 91, 15-31. https://doi.org/10. 5343/bms.2014.1036
- Allendorf, F. W., England, P. R., Luikart, G., Ritchie, P. A., & Ryman, N. (2008). Genetic effects of harvest on wild animal populations. Trends in Ecology and Evolution, 23, 327-337. https://doi.org/10.1016/j.tree.2008.02.008
- Arana, P., Melo, T., Noziglia, L., Sepulveda, I., Silva, N., Yany, G., & Yanez, E. (1975). Los recursos demersales de la region de Valparaiso. Revista de la Comision Permanente del Pacifico Sur, 3, 39-61.
- Arana, P., & Nakamishi, A. (1971). La pesqueria del camaron nailon (Heterocarpus reedi) frente a la costa de Valparaiso. Investigaciones Marinas, Valparaiso, 2, 61-92.
- Arana, P., Noziglia, L., & Yany, G. (1976). Crecimiento, reproduccion, factor de condicion y estructura poblacional del camaron nylon (Heterocarpus reedi) (Crustacea, Decapoda, Caridea). Ciencia y Tecnologia del Mar, 2, 3-98.
- Aschan, M., & Ingvaldsen, R. (2009). Recruitment of shrimp (Pandalus borealis) in the Barents Sea related to spawning stock and environment. Deep-Sea Research II Topical Studies in Oceanography, 56, 2012-2022. https://doi.org/10.1016/j.dsr2. 2008.11.012
- Atencia-Galindo, M. A., Narvaez, J. C., Ramirez, A., Paramo, J., & Aguire-Pabon, J. C. (2021). Genetic structure of the pink shrimp Penaeus (Farfantepenaeus) notialis (Peres-Farfante, 1967) (Decapoda: Penaeidae) in the Colombian Caribbean. Fisheries Research, 243, 106052. https://doi.org/10.1016/j.fishres.2021. 106052
- Azuma, N., & Chiba, S. (2017). Genetic population structure of the Hokkai shrimp Pandalus latirostris Rathbun, 1902 (Decapoda: Caridea: Pandalidae) from Zostera seagrass beds in Hakkaido, Japan. Journal of Crustacean Biology, 38, 1-9. https://doi.org/ 10.1093/jcbiol/rux116
- Ball, A. O., & Chapman, R. W. (2003). Population genetic analysis of white shrimp, Litopenaeus setiferus, using microsatellite genetic markers. Molecular Ecology, 12, 2319-2330. https://doi.org/10. 1046/j.1365-294x.2003.01922.x
- Barbieri, M. A., Canales, C., Leiva, B., Bahamonde, R., Penailillo, T., Pool, H., & Montenegro, C. (2001). Evaluacion directa de langostino colorado de la I a IV Regiones, 1999. Final Report FIP 99-30 (p. 170). Retrieved September 20, 2020, from https:// www. subpesca.cl/fipa/613/articles-89668_informe_final.pdf
- Beerli, P., & Palczewski, M. (2010). Unified framework to evaluate panmixia and migration direction among multiple sampling locations. Genetics, 185, 313-326. https://doi.org/10.1534/genetics. 109.112532
- Blanco, J. L., Thomas, A. C., Carr, M. E., & Strub, P. T. (2001). Seasonal climatology of hydrographic conditions in the upwelling region off northern Chile. Journal of Geophysical Research: Oceans, 106(451-11), 467. https://doi.org/10.1029/2000JC000540
- Borrell, Y. J., Arenal, F., Mbemba, Z. M., Santana, O., Diaz-Fernandez, R., Vazquez, E., Blanco, G., Sanchez, J. A., & Espinosa, G. (2007). Spatial and temporal genetic analysis of the Cuban white shrimp Penaeus (Litopenaeus) schmitti. Aquaculture, 272, S125-S138. https://doi.org/10.1016/j.aquaculture.2007.08.015
- Bouzat, J. L. (2010). Conservation genetics of population bottlenecks: the role of chance, selection, and history. Conservation Genetics, 11, 463-478. https://doi.org/10.1007/s10592-010-0049-0
- Bradbury, I. R., Laurel, B., Snelgrove, P. V., Bentzen, P., & Campana, S. E. (2008). Global patterns in marine dispersal estimates: the influence of geography, taxonomic category and life history. Proceedings of the Royal Society of London b: Biological Sciences, 275, 1803-1809. https://doi.org/10.1098/rspb.2008.0216
- Canales, C. M., Company, J. B., & Arana, P. M. (2016). Population structure of nylon shrimp Heterocarpus reedi (Crustacea: Caridea) and its relationship with environmental variables off Chile. Latin American Journal of Aquatic Research, 44, 144- 154. https://doi.org/10.3856/vol44-issue1-fulltext-15
- Cannas, R., Sacco, F., Follesa, M. C., Sabatini, A., Arculeo, M., Lo Brutto, S., Maggio, T., Deiana, A. M., & Cau, A. (2012). Genetic variability of the blue and red shrimp Aristeus antennatus in the Western Mediterranean Sea inferred by DNA microsatellite loci. Marine Ecology, 33, 350-363. https://doi.org/10.1111/j.1439- 0485.2011.00504.x
- Cardenas, L., Castilla, J. C., & Viard, F. (2009). A phylogeographical analysis across three biogeographical provinces of the southeastern Pacific: the case of the marine gastropod Concholepas concholepas. Journal of Biogeography, 36, 969-981. https://doi. or g/10.1111/j.1365-2699.2008.02056.x
- Chase, J. M., Kraft, N. J., Smith, K. G., Vellend, M., & Inouye, B. D. (2011). Using null models to disentangle variation in community dissimilarity from variation in α-diversity. Ecosphere, 2, 1-11. https://doi.org/10.1890/ES10-00117.1
- Chu, T.-J., Wang, D., Huang, H.-L., Lin, F.-J., & Tzeng, T.-D. (2012). Population structure and historical demography of the whiskered velvet shrimp (Metapenaeopsis barbata) off China and Taiwan inferred from the mitochondrial control region. Zoological Studies, 51, 99-107.
- Cowen, R. K., & Sponaugle, S. (2009). Larval dispersal and marine population connectivity. Annual Review of Marine Science, 1, 443-466. https://doi.org/10.1146/annurev.marine.010908.163757
- Darriba, D., Taboada, G. L., Doallo, R., & Posada, D. (2012). jModelTest 2: More models, new heuristics and parallel computing. Nature Methods, 9, 772-772. https://doi.org/10.1038/nmeth.2109
- De Croos, M., & Palsson, S. (2012). Population biology and genetic diversity of two adjacent shrimp (Parapenaeopsis coromandelica) populations exploited under different fishing pressures in the coastal waters of Sri Lanka.Journal of the Marine Association of the UK, 92, 819-829. https://doi.org/10.1017/S0025315411000828
- Drummond, A. J., Ashton, B., Cheung, M., Heled, J., Kearse, M., Moir, R., & Wilson, A. (2009). Geneious v4.7. http://www.geneious.com
- Drummond, A. J., & Rambaut, A. (2007). BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology, 7, 214. https://doi.org/10.1186/1471-2148-7-214
- Drummond, A. J., Suchard, M. A., Xie, D., & Rambaut, A. (2012). Bayesian phylogenetics with BEAUti and the BEAST 1.7. Molecular Biology and Evolution, 29, 1969-1973. https://doi. or g/10.1093/molbev/mss075
- Dupanloup, I., Schneider, S., & Excoffier, L. (2002). A simulated annealing approach to define the genetic structure of populations. Molecular Ecology, 11, 2571-2581. https://d oi.o rg/1 0. 1046/j.1365-294x.2002.01650.x
- Excoffier, L., & Lischer, H. E. (2010). Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources, 10, 564- 567. https://doi.org/10.1111/j.1755-0998.2010.02847.x
- Fernandez, M. V., Heras, S., Vinas, J., Maltagliati, F., & Roldan, M. I. (2014). Multilocus comparative phylogeography of two aristeid shrimps of high commercial interest (Aristeus antennatus and Aristaeomorpha foliacea) reveals different responses to past environmental changes. PLoS One, 8, e59033. https://doi.org/10. 1371/journal.pone.0059033
- Folmer, O., Black, M., Hoeh, W., Lutz, R., & Vrijemhoek, R. (1994). DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3, 294-299.
- Fonseca, T., & Farias, M. (1987). Estudio del proceso de surgencia en la costa chilena utilizando percepcion remota. Investigaciones Pesqueras, 34, 33-46.
- Fratini, S., Ragionieri, L., Deli, T., Harrer, A., Marino, I. A. M., Cannicci, S., Zane, L., & Schubart, C. D. (2016). Unravelling population genetic structure with mitochondrial DNA in a notional panmictic coastal crab species: Sample size makes the difference. BMC Evolutionary Biology, 16, 150. https://d oi. or g/10.1186/s12862-016-0720-2
- Fu, Y., & Li, W. (1993). Statistical tests of neutrality of mutations. Genetics, 133, 693-709.
- Haye, P. A., & Munoz-Herrera, N. C. (2013). Isolation with differentiation followed by expansion with admixture in the tunicate Pyura chilensis. BMC Evolutionary Biology, 13, 252. https:// doi.org/10.1186/1471-2148-13-252
- Haye, P. A., Segovia, N. I., Munoz-Herrera, N. C., Galvez, F. E., Martinez, A., Meynard, A., Pardo-Gandarillas, M. C., Poulin, E., & Faugeron, S. (2014). Phylogeographic structure in benthic marine invertebrates of the southeast pacific coast of Chile with differing dispersal potential. PLoS One, 9, e88613. https://doi. or g/10.1371/journal.pone.0088613
- Haye, P. A., Segovia, N. I., Varela, A. I., Rojas, R., Rivadeneira, M. M., & Thiel, M. (2019). Genetic and morphological divergence at a biogeographic break in the beach-dwelling brooder Excirolana hirsuticauda Menzies (Crustacea, Peracarida). BMC Evolutionary Biology, 19, 118. https://doi.org/10.1186/ s12862-019-1442-z
- Hedgecock, D., Barber, P. H., & Edmands, S. (2007). Genetic approaches to measuring connectivity. Oceanography, 20, 70-79. https://doi.org/10.5670/oceanog.2007.30
- Heras, S., Planella, L., Garcia-Marin, J.-L., Vera, M., & Roldan, M. I. (2019). Genetic structure and population connectivity of the blue and red shrimp Aristeus antennatus. Scientific Reports, 9, 13531. https://doi.org/10.1038/s41598-019-49958-5
- Hauser, L., Adcock, G. J., Smith, P. J., Bernal Ramirez, J. H., & Carvalho, G. R. (2002). Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper (Pagurus auratus). Proceedings of the National Academy of Sciences of the USA, 99, 11742-11747.https://doi.org/10.1073/ pnas.172242899
- Ho, S., Lanfear, R., Bromham, L., Phillips, M., Soubrier, J., Rodrigo, A., & Cooper, A. (2011). Time-dependent rates of molecular evolution. Molecular Ecology, 20, 3087-3101. https://doi.org/ 10.1111/j.1365-294X.2011.05178.x
- Ho, S., Phillips, M., Cooper, A., & Drummond, A. (2005). Time dependency of molecular rate estimates and systematic overestimation of recent divergence times. Molecular Biology and Evolution, 22, 1561-1568. https://doi.org/10.1093/molbev/msi145
- Ho, S., Shapiro, B., Phillips, M., Cooper, A., & Drummond, A. (2007). Evidence for time dependency of molecular rates.Systematic Biology, 56, 515-522. https://doi.org/10.1080/10635150701435401
- Hoffman, J. I., Peck, L. S., Linse, K., & Clarke, A. (2010). Strong population genetic structure in a Broadcast-spawning Antarctic marine invertebrate. Journal of Heredity, 102, 55-56. https://doi. or g/10.1093/jhered/esq094
- Hudson, R. R. (2000). A new statistic for detecting genetic differentiation. Genetics, 155, 2001-2014.
- Hulton, N. R. J., Purves, R. S., McCulloch, R. D., Sugden, D. E., & Bentley, M. J. (2002). The last glacial maximum and deglaciation in southern South America. Quaternary Science Reviews, 21, 233-241. https://doi.org/10.1016/S0277-3791(01)00103-2
- Jiang, G. C., Chan, T. Y., & Shih, T. W. (2014). Morphology of the first zoeal stage of three deep-water pandalid shrimps, Heterocarpus abulbus Yang, Chan & Chu, 2010, H. hayashii Crosnier, 1988 and H. sibogae De Man, 1917 (Crustacea: Decapoda: Caridea). Zootaxa, 3768, 428-436. https://doi.org/10.11646/zootaxa. 3768.4.2
- Jiang, G. C., Landeira, J. M., Shih, T. W., & Chan, T. Y. (2016). Larval development to the ninth zoeal stage of Heterocarpus abulbus Yang, Chan and Chu, 2010 (Decapoda: Caridea: Pandalidae), a deep-water shrimp with high fishery potential. Journal of Crustacean Biology, 36, 310-328. https://doi.org/10.1163/1937240X-00002423
- Jorde, P. E., Sovik, G., Wesrgaard, J. I., Albertsen, J., Andre, C., Hvingel, C., Johansen, T., Sandvik, A. D., Kingsley, M., & Jordstad, K. E. (2015). Genetically distinct populations of northern shrimp, Pandalus borealis, in the North Atlantic: Adaptation to different temperatures as an isolation factor. Molecular Ecology, 24, 1742-1757. https://doi.org/10.1111/mec.13158
- Kaiser, J., Lamy, F., & Hebbeln, D. (2005). A 70-kyr sea surface temperature record off southern Chile (ocean drilling program site 1233). Paleoceanography, 20, 1-15. https://doi.org/10.1029/ 2005PA001146
- Kaiser, J., Schefuss, E., Lamy, F., Mohtadi, M., & Hebbeln, D. (2008). Glacial to Holocene changes in sea surface temperature and coastal vegetation in north central Chile: high versus low latitude forcing. Quaternary Science Reviews, 27(21-22), 2064-2075.
- Kass, R. E., & Raftery, A. E. (1995). Bayes factors. Journal of the American Statistical Association, 90, 773-795. https://doi.org/ 10.1080/01621459.1995.10476572
- Kearse, M., Moir, R., Wilson, A., Stones-Havas, S., Cheung, M., Sturrock, S., Buxton, S., Cooper, A., Markowitz, S., Duran, C., Thierer, T., Ashton, B., Meintjes, P., & Drummond, A. (2012). Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.Bioinformatics, 28, 1647-1649. https://doi.org/10.1093/bioinformatics/bts199
- Kehdkar, G. D., Reddy, A. C., Ron, T. B., & Haymer, D. (2013). High levels of genetic diversity in Penaeus monodon populations from the east coast of India. Springerplus, 2, 671. https://doi.org/10. 1186/2193-1801-2-671
- Kelly, R. P., & Palumbi, S. R. (2010). Genetic structure among 50 species of the Northeastern Pacific rocky intertidal community. PLoS One, 5, e8594. https://doi.org/10.1371/journal.pone.0008594
- Kilada, R., & Acuna, E. (2015). Direct age determination by growth band counts of three commercially important crustacean species in Chile. Fisheries Research, 170, 134-143. https://doi.org/10. 1016/j.fishres.2015.05.026
- Knutsen, H., Jorde, P. E., Gonzalez, E. B., Eigaard, O. R., Pereyra, R. T., Sannaes, H., Dahl, M., Andre, C., & Sovik, G. (2015). Does population genetic structure support present management regulations of the northern shrimp (Pandalus borealis) in Skagerrak and the North Sea? ICES Journal of Marine Science, 72, 863-871. https://doi.org/10.1093/icesjms/fsu204
- Kong, X. Y., Li, Y. L., Shi, W., & Kong, J. (2010). Genetic variation and evolutionary demography of Fenneropenaeus chinensis populations, as revealed by the analysis of mitochondrial control region sequences. Genetics and Molecular Biology, 33, 379-389. https://doi.org/10.1590/S1415-47572010005000019
- Landeira, J. M., Lozano-Soldevilla, F., Almansa, E., & Gonzalez- Gordillo, J. I. (2010). Early larval morphology of the armed nylon shrimp Heterocarpus ensifer ensifer A. Milne-Edwards, 1881 (Decapoda, Caridea, Pandalidae) from laboratory culture. Zootaxa, 2427, 1-14. https://doi.org/10.11646/zootaxa.2427.1.1
- Legendre, P., & Gallagher, E. D. (2001). Ecologically meaningful transformations for ordination of species data. Oecologia, 129, 271-280. https://doi.org/10.1007/s004420100716
- Lessios, H. A. (2008). The great American Schism: Divergence of marine organisms after the rise of the Central American Isthmus. Annual Review of Ecology, Evolution and Systematics, 39, 63-91. https://doi.org/10.1146/annurev.ecolsys.38.091206. 095815
- Liao, Y., Ma, K. Y., De Grave, S., Komai, T., & Chan, T.-Y. (2019). Systematic analysis of the caridean shrimp superfamily Pandaloidea (Crustacea: Decapoda) based on molecular and morphological evidence. Molecular Phylogenetics and Evolution, 134, 200-210. https://doi.org/10.1016/j.ympev.2019.02.006
- Librado, P., & Rozas, J. (2009). DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25, 1451-1452. https://doi.org/10.1093/bioinformatics/btp187
- Lipcius, R. N., Eggleston, D. B., Schreiber, S. J., Seitz, R. D., Shen, J., Sisson, M., Stockhausen, W. T., & Wang, H. V. (2008). Importance of metapopulation connectivity to restocking and restoration of marine species. Reviews in Fisheries Science, 16, 101-110. https://doi.org/10.1080/10641260701812574
- Marra, A., Mona, S., Sa, R. M., D'Onghia, G., & Maiorano, P. (2015). Population genetic history of Aristeus antennatus (Crustacea: Decapoda) in the Western and Central Mediterranean Sea. PLoS One, 10, e0117272. https://doi.org/10.1371/ jour nal.pone.0117272
- Martinez, I., Aschan, M., Skjerdal, T., & Aljanabi, S. M. (2006). The genetic structure of Pandalus borealis in the Northeast Atlantic determined by RAPD analysis. ICES Journal of Marine Science, 63, 840-850. https://doi.org/10.1016/j.icesjms.2006.03.006
- McCulloch, R. D., Bentley, M. J., Purves, R. S., Hulton, N. R. J., Sugden, D. E., & Clapperton, C. M. (2000). Climatic inferences from glacial and palaeoecological evidence at the last glacial termination, southern South America. Journal of Quaternary Science, 15, 409-417. https://doi.org/10 . 1002/1099-1417(200005)15 :4% 3c409::AID-JQS539%3e3.0.CO;2-%23
- McMillen-Jackson, A. L., & Bert, T. M. (2003). Disparate patterns of population genetic structure and population history in two sympatric penaeid shrimp species (Farfantepenaeus aztecus and Litopenaeus setiferus) in the eastern United States. Molecular Ecology, 12, 2895-2905. https://doi.org/10.1046/j.1365-294X. 2003.01955.x
- McMillen-Jackson, A. L., & Bert, T. M. (2004). Genetic diversity in the mtDNA control region and population structure in the pink shrimp Farfantepenaeus duorarum. Journal of Crustacean Biology, 24, 101-109. https://doi.org/10.1651/C-2372
- Mujica, A., Acuna, E., & Nava, M. L. (2011). Distribucion y abundancia de larvas de Heterocarpus reedi Bahamonde, 1955, Cervimunida johni Porter, 1903 y Pleuroncodes monodon (H. Milne Edwards, 1837), frente a Coquimbo y Caldera, Chile. Latin American Journal of Aquatic Research, 39, 138-150. https:// doi.org/10.3856/vol39-issuel-fulltext-13
- Oksanen, J., Kindt, R., Legendre, P., O'Hara, B., Stevens, M. H. H., Oksanen, M. J., & Suggests, M. A. S. S. (2017). VEGAN: Community Ecology Package. R package version 2.4-3. https:// CRAN.R-project.org/package=vegan
- Palsboll, P. J., Berube, M., & Allendorf, F. W. (2006). Identification of management units using population genetic data. Trends in Ecology and Evolution, 22, 11-16. https://d oi.o rg/1 0.1 016/j.t ree. 2006.09.003
- Pedersen, S. A., Storm, L., & Simonsen, C. S. (2002). Northern shrimp Pandalus borealis recruitment in West Greenland waters Part I Distribution of Pandalus shrimp larvae in relation to hydrography and plankton.Journal of Northwest Atlantic Fishery Science, 30, 47-60. https://doi.org/10.2960/J.v30.a3
- Petit, R. J., Mousadik, A. E., & Pons, O. (1998). Identifying populations for conservation on the basis of genetic markers. Conservation Biology, 12, 844-855. https://doi.org/10.1111/j.1523-1739. 1998.96489.x
- Pineda, J., Hare, J. A., & Sponaugle, S. (2007). Larval transport and dispersal in the coastal ocean and consequences for population connectivity. Oceanography, 20, 22-39. https://d oi.o rg/1 0.5 670/ oceanog.2007.27
- Pinsky, M. L., & Palumbi, S. R. (2014). Meta-analysis reveals lower genetic diversity in overfished populations.Molecular Ecology, 23, 29-39. https://doi.org/10.1111/mec.12509
- Purushothaman, P., Chakraborty, R. D., Gidda, M., & Ganesan, K. (2020). Investigation of genetic diversity and stock structure of Aristeus alcocki Ramadan, 1938 (Decapoda: Aristeidae) populations in the Indian coast with microsatellite markers. Fisheries Research, 227, 205550. https://doi.org/10.1016/j.fishres.2020. 105550
- R Development Core Team. (2022). R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0.http://www.R-project.org
- Rambaut, A., & Drummond, A. J. (2007). Tracer v1.5. http://b east.b io. ed.ac.uk
- Robainas-Barcia, A., Blanco, G., Sanchez, J. A., Monnerot, M., Solignac, M., & Garcia-Machdo, E. (2008). Spatiotemporal genetic differentiation of Cuban natural populations of the pink shrimp Farfantepenaeus notialis. Genetica, 133, 283-294. https://doi.org/10.1007/s10709-007-9212-z
- Rogers, A. R., & Harpending, H. (1992). Population growth makes waves in the distribution of pairwise genetic differences.Molecular Biology and Evolution, 9, 552-569. https://doi.org/10.1093/ o xfordjournals.molbev.a040727
- Romero, O. E., Kim, J. H., & Hebbeln, D. (2006). Paleoproductivity evolution off central Chile from the last glacial maximum to the early Holocene. Quaternary Research, 65, 519-525. https://doi. or g/10.1016/j.yqres.2005.07.003
- Sarda, F., Roldan, M. I., Heras, S., & Maltagliati, F. (2010). Influence of the genetic structure of the red and blue shrimp, Aristeus antennatus (Risso, 1816), on the sustainability of a deep-sea population along a depth gradient in the western Mediterranean. Scientia Marina, 74, 569-575.https://doi.org/10.3989/scimar.2010.74n3569
- Segovia, N. I., Gonzalez-Wevar, C. A., Naretto, J., Rosenfeld, S., Brickle, P., Hune, M., Bernal, V., Haye, P. A., & Poulin, E. (2022). The right tool for the right question: Contrasting biogeographic patterns in the notothenioid fish. Proceedings of the Royal Society B, 20212738. https://doi.org/10.1098/rspb.2021. 2738
- Shumway, S. E., Perkins, H. C., Schick, D. F., & Stickney, A. P. (1985). Synopsis of biological data on the pink shrimp, Pandalus borealis Kroyer 1838. FAO Fisheries Synopsis, 144. pp. 157.
- Tajima, F. (1989). Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123, 585-595.
- Taylor, M. L., & Roterman, C. N. (2017). Invertebrate population genetics across Earth's largest habitat: the deep-sea floor. Molecular Ecology, 26, 4872-4896. https://doi.or g/10 11 . 11/me c.14 237
- Teodoro, S. S. A., da Silva Cortinhas, M. C., Proietti, M. C., Costa, R. C., & Dumont, L. F. C. (2020). High genetic connectivity among pink shrimp Farfantepenaeus paulensis (Perez-Farfante, 1967) groups along the south-southeastern coast of Brazil. Estuarine and Coastal Shelf Science, 232, 106488. https://doi.org/10. 1016/j.ecss.2019.106488
- Thatje, S., & Bacardit, R. (2000). Larval development of Austropandalus grayi (Cunningham, 1871) (Decapoda: Caridea: Pandalidae) from the southwestern Atlantic Ocean. Crustaceana, 73, 609-628. https://doi.org/10.1163/156854000504697
- Thorpe, J. P., Sole-Cava, A. M., & Watts, P. C. (2000). Exploited marine invertebrates: Genetics and fisheries. Hydrobiologia, 420, 165-184. https://doi.org/10.1023/A:1003987117508
- Vu, N. T. T., Zenger, K. R., Guppy, J. L., Sellars, M. J., Silva, C. N. S., Kjeldsen, S. R., & Jerry, D. R. (2020). Fine-scale population structure and evidence of local adaptation in Australian giant tiger shrimp (Penaeus monodon) using SNP analysis. BMC Genomics, 21, 669. https://doi.org/10.1186/s12864-020-07084-x
- Wang, L., Yang, J., Sun, M., Yang, C., Cui, Z., Jang, I. K., & Song, L. (2014). The genetic diversity and differentiation of shrimp Fenneropenaeus chinensis in the Yellow Sea revealed by polymorphism in control region of mitochondrial DNA. Invertebrate Survival Journal, 11, 309-318. http://www.isj.unimo.it/index. php/ISJ/article/view/331
- Waqairatu, S. S., Dierens, L., Cowley, J. A., Dixon, T. J., Johnson, K. N., Barnes, A. C., & Li, Y. T. (2012). Genetic analysis of Black Tiger shrimp (Penaeus monodon) across its natural distribution range reveals more recent colonization of Fiji and other South Pacific islands. Ecology and Evolution, 8, 2057-2071. https:// doi.org/10.1002/ece3.316
- Weersing, K., & Toonen, R. J. (2009). Population genetics, larval dispersal, and connectivity in marine systems. Marine Ecology Progress Series, 393, 1-12. https://doi.org/10.3354/meps08287
- Wehrtmann, I. S., Arana, P., Barriga, E., Gracia, A., & Pezzuto, P. R. (2012). Deep-water shrimp fisheries in Latin America: a review. Latin American Journal of Aquatic Research, 40, 497-535.
- Weir, B. S., & Cockerham, C. C. (1984). Estimating F-Statistics for the analysis of population structure. Evolution, 38, 1358-1370. https://doi.org/10.1111/j.1558-5646.1984.tb05657.x
- Willi, Y., Van Buskirk, J., & Hoffmann, A. A. (2006). Limits to the adaptive potential of small populations. Annual Review of Ecology, Evolution, and Systematics, 37, 433-438. https://w ww.j stor. or g/stable/30033839
- Yannicelli, B., & Castro, L. (2013). Ecophysiological constrains on the larvae of Pleuroncodes monodon and the implications for its reproductive strategy in poorly oxygenated waters of the Chile- Peru undercurrent. Journal of Plankton Research, 35, 566-581. https://doi.org/10.1093/plankt/fbs090
- Yanez, E. (1974). Distribucion y abundancia relativa estacional de los recursos disponibles a un arte de arrastre camaronero frente a la costa de Valparaiso (invierno y primavera 1972). Investigaciones Marinas, 5, 125-138.
- Yanez, E., & Barbieri, M. A. (1974). Distribucion y abundancia relativa de los recursos disponibles a un arte de arrastre camaronero frente a la costa de Valparaiso (invierno 1973). Investigaciones Marinas, 5, 137-156.