Published August 20, 2024 | Version v1
Journal article Open

Data mobilisation at the Fund of Invertebrates of the State Museum of Natural History of the NAS of Ukraine

  • 1. State Museum of Natural History of the NAS of Ukraine, Lviv, Ukraine
  • 2. State Museum of Natural History of the NAS of Ukraine, Lviv, Ukraine|Separate Structural Department "Lviv Professional College of the Lviv National Environmental University", Lviv, Ukraine
  • 3. Ivan Franko National University of Lviv, Lviv, Ukraine
  • 4. Institute of Ecology of the Carpathians of the NAS of Ukraine, Lviv, Ukraine

Description

The described dataset contains occurrence records of invertebrate specimens deposited at the State Museum of Natural History of the NAS of Ukraine, Lviv, Ukraine (SMNH NASU). It combines diverse taxonomic groups, mostly belonging to the class Insecta of the phylum Arthropoda, that were selected as prioritised for digitisation in war conditions. Selected specimens were ascertained as those being the most vulnerable to hostilities and requiring virtual preservation. Such virtual preservation is essential in the war realities as collection can be lost or damaged at any moment, resulting in a significant retrospective biodiversity data gap. At the same time, collection virtualisation and its deposition on the internet grant remote access to scientists who cannot visit it in person due to the war. Moreover, we believe that the mobilisation of the data from the Ukrainian collections and their publication online are essential for the integration of Ukrainian research facilities into a global scientific biodiversity pool.

A total of 3,660 occurrence records mobilised in 2023-2024 from the collection of invertebrates of the SMNH NASU, were published. This dynamic dataset will be continually supplied by new records during further digitisation work.

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References

  • Ball-Damerow J, Brenskelle L, Barve N, Soltis P, Sierwald P, Bieler R, LaFrance R, Ariño A, Guralnick R (2019) Research applications of primary biodiversity databases in the digital age. PLOS One 14 (9). https://doi.org/10.1371/journal.pone.0215794
  • Blagoderov V, Penn M, Sadka M, Hine A, Brooks S, Siebert D, Sleep C, Cafferty S, Cane E, Martin G, Toloni F, Wing P, Chainey J, Duffell L, Huxley R, Ledger S, McLaughlin C, Mazzetta G, Perera J, Crowther R, Douglas L, Durant J, Scialabba E, Honey M, Huertas B, Howard T, Carter V, Albuquerque S, Paterson G, Kitching I (2017) iCollections methodology: workflow, results and lessons learned. Biodiversity Data Journal 5 https://doi.org/10.3897/bdj.5.e21277
  • Causey D, Janzen D, Peterson AT, Vieglais D, Krishtalka L, Beach J, Wiley E (2004) Museum Collections and Taxonomy. Science 305 (5687): 1106‑1107. https://doi.org/10.1126/science.305.5687.1106b
  • Dupont S, Humphries J, Butcher A, Baker E, Balcells L, Price B (2020) Ahead of the curve: three approaches to mass digitisation of vials with a focus on label data capture. Research Ideas and Outcomes 6 https://doi.org/10.3897/rio.6.e53606
  • eBird (2024) https://ebird.org/
  • Flemons P, Berents P (2012) Image based Digitisation of Entomology Collections: Leveraging volunteers to increase digitization capacity. ZooKeys 209: 203‑217. https://doi.org/10.3897/zookeys.209.3146
  • GBIF (2024a) Global Biodiversity Information Facility. https://www.gbif.org/
  • GBIF (2024b) IPT: The Integrated Publishing Toolkit. https://www.gbif.org/uk/ipt
  • Grattarola F, Botto G, da Rosa I, Gobel N, González E, González J, Hernández D, Laufer G, Maneyro R, Martínez-Lanfranco J, Naya D, Rodales A, Ziegler L, Pincheira-Donoso D (2019) Biodiversidata: An open-access biodiversity database for Uruguay. Biodiversity Data Journal 7 https://doi.org/10.3897/bdj.7.e36226
  • Guzmán-Jacob V, Weigelt P, Craven D, Zotz G, Krömer T, Kreft H (2021) Biovera-Epi: A new database on species diversity, community composition and leaf functional traits of vascular epiphytes along gradients of elevation and forest-use intensity in Mexico. Biodiversity Data Journal 9 https://doi.org/10.3897/bdj.9.e71974
  • Gyeltshen C, Pem T (2022) Biodiversity data use and biorepositories in Bhutan. Biodiversity Information Science and Standards 6 https://doi.org/10.3897/biss.6.93884
  • Harris K, Marsico T (2017) Digitizing specimens in a small herbarium: A viable workflow for collections working with limited resources. Applications in Plant Sciences 5 (4). https://doi.org/10.3732/apps.1600125
  • Heberling JM, Miller J, Noesgaard D, Weingart S, Schigel D (2021) Data integration enables global biodiversity synthesis. Proceedings of the National Academy of Sciences 118 (6). https://doi.org/10.1073/pnas.2018093118
  • Holmes M, Hammond T, Wogan GU, Walsh R, LaBarbera K, Wommack E, Martins F, Crawford J, Mack K, Bloch L, Nachman M (2016) Natural history collections as windows on evolutionary processes. Molecular Ecology 25 (4): 864‑881. https://doi.org/10.1111/mec.13529
  • iDigBio (2024) Integrated digitized biocollections. https://www.idigbio.org
  • iNaturalist (2024) https://www.inaturalist.org/
  • Nelson G, Sweeney P, Wallace L, Rabeler R, Allard D, Brown H, Carter JR, Denslow M, Ellwood E, Germain‐Aubrey C, Gilbert E, Gillespie E, Goertzen L, Legler B, Marchant DB, Marsico T, Morris A, Murrell Z, Nazaire M, Neefus C, Oberreiter S, Paul D, Ruhfel B, Sasek T, Shaw J, Soltis P, Watson K, Weeks A, Mast A (2015) Digitization workflows for flat sheets and packets of plants, algae, and fungi. Applications in Plant Sciences 3 (9). https://doi.org/10.3732/apps.1500065
  • Nelson G, Ellis S (2018) The history and impact of digitization and digital data mobilization on biodiversity research. Philosophical Transactions of the Royal Society B: Biological Sciences 374 (1763). https://doi.org/10.1098/rstb.2017.0391
  • Nieva de la Hidalga A, Rosin P, Sun X, Bogaerts A, De Meeter N, De Smedt S, Strack van Schijndel M, Van Wambeke P, Groom Q (2020) Designing an herbarium digitisation workflow with built-in image quality management. Biodiversity Data Journal 8 https://doi.org/10.3897/bdj.8.e47051
  • Novikov A, Savytska A, Kuzyarin O, Nachychko V, Susulovska S, Rizun V, Susulovsky A, Hushtan H, Hushtan K, Leleka D (2024) Data mobilisation in the LWS Herbarium: success and prospects. Biodiversity Data Journal 12 https://doi.org/10.3897/bdj.12.e117292
  • Novotný P, Brůna J, Chytrý M, Kalčík V, Kaplan Z, Kebert T, Rohn M, Řezníčková M, Štech M, Wild J (2022) Pladias platform: Technical description of the database structure. Biodiversity Data Journal 10 https://doi.org/10.3897/bdj.10.e80167
  • Observation International (2024) https://observation.org/
  • OpenStreetMap contributors (2024) OpenStreetMap. https://www.openstreetmap.org/
  • Rizun V, Scherbachenko T (2019) The Data Centre "Biodiversity of Ukraine" – the instrument for work with nature history museums collections. Nature History Museology 5: 247‑257. [In Ukrainian]. URL: http://museumkiev.org/public/museology/museology2019/museology5-2019.pdf
  • Rizun V, Glotov S, Hushtan H, Hushtan K, Konovalova I, Kuzyarin O, Savytska A, Serediuk A, Scherbachenko T, Yanytsky T (2020) The use of informatics resource Data Centre "Biodiversity of Ukraine" for biota monitoring. Monitoring and conservation of biodiversity in Ukraine. Series Conservation Biology in Ukraine 16 (3): 111‑119. [In Ukrainian].
  • Rizun V, Susulovsky A, Hushtan H, Hushtan K, Susulovska S, Leleka D, Novikov A (2024) SMNH NASU Invertebrates collection. Occurrence dataset. 1.2. State Museum of Natural History of the National Academy of Sciences of Ukraine. URL: https://doi.org/10.15468/ugtaz7
  • Shultz A, Adams B, Bell K, Ludt W, Pauly G, Vendetti J (2020) Natural history collections are critical resources for contemporary and future studies of urban evolution. Evolutionary Applications 14 (1): 233‑247. https://doi.org/10.1111/eva.13045
  • Starzyk R (2004) Contribution of entomologists of Lviv to the development of nature conservation in Eastern Galicia. Scientific Proceedings of the Ukrainian State Forestry University 14 (8): 38‑46.
  • State Museum of Natural History of the NAS of Ukraine (2024) Data Center Biodiversity of Ukraine. The information resource for Ukraine biota diversity. http://dc.smnh.org/
  • TDWG (2024) Darwin Core. https://dwc.tdwg.org/
  • Vattakaven T, George R, Balasubramanian D, Réjou-Méchain M, Muthusankar G, Ramesh B, Prabhakar R (2016) India Biodiversity Portal: An integrated, interactive and participatory biodiversity informatics platform. Biodiversity Data Journal 4 https://doi.org/10.3897/bdj.4.e10279
  • Wetzel F, Bingham H, Groom Q, Haase P, Kõljalg U, Kuhlmann M, Martin C, Penev L, Robertson T, Saarenmaa H, Schmeller D, Stoll S, Tonkin J, Häuser C (2018) Unlocking biodiversity data: Prioritization and filling the gaps in biodiversity observation data in Europe. Biological Conservation 221: 78‑85. https://doi.org/10.1016/j.biocon.2017.12.024