Published August 14, 2024
| Version v1
Dataset
Open
Datasets for optical tweezer autoregressive hidden Markov modeling
Description
Data to regenerate figures and tables analyzing optical tweezer data with arHMM. OT_arHMM.zip contains the ot_arhmm library needed to analyze these files. scripts.zip contains all the jupyter notebooks used to analyze data and make figures and tables. data.zip contains the raw data and processed_data.zip contains data that has already been put through the HMMs for analysis. These processed files can be generated from the raw data by running the analyze_all.ipynb notebook. All other notebooks require processed files to be present before running.
Files
scripts.zip
Additional details
Software
- Repository URL
- https://github.com/kamenetska-lab/OT_arHMM
- Programming language
- Python