Published August 13, 2024
| Version v1.0.8
Software
Open
lsaBGC-Pan
Creators
Description
- Add catches for when trimal trimmed alignment produces a blank output.
- Remove
-strictfor trimal usage in lsaBGC-Reconcile to create orthogroup trees (note, option is still kept for construction of species tree in phylogenate). - Set OMP_NUM_THREADS env variable in lsaBGC-Pan to prevent Rscript executions for plotting from using > 1 thread.
What's Changed
- Raufs patch 1 by @raufs in https://github.com/Kalan-Lab/lsaBGC-Pan/pull/10
Full Changelog: https://github.com/Kalan-Lab/lsaBGC-Pan/compare/v1.0.7...v1.0.8
Notes
If you use this software, please cite the lsaBGC manuscript published in Microbial Genomics.
Files
Kalan-Lab/lsaBGC-Pan-v1.0.8.zip
Files
(5.4 MB)
| Name | Size | Download all |
|---|---|---|
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md5:5f233d34de248a001a53151dc0e64584
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Additional details
Related works
- Is supplement to
- Software: https://github.com/Kalan-Lab/lsaBGC-Pan/tree/v1.0.8 (URL)