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Published August 13, 2024 | Version v1.4.4
Software Open

spae: Phage annotations and predictions

Authors/Creators

Description

Two major changes:

  • adding the option to run pharokka with --pyrodigal-gv to test for alternate coding genes. To run the alternative gene prediction tool, change this in the config.yaml file
  • The phage plots in the final file were failing. This is fixed now

Notes

If you use this software, please cite it as below.

Files

linsalrob/sphae-v1.4.4.zip

Files (20.3 MB)

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md5:d5cb89b8d3143da75e8ae5ed60edd427
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Additional details

Related works

Is supplement to
Software: https://github.com/linsalrob/sphae/tree/v1.4.4 (URL)