Published August 9, 2024
| Version v1
Dataset
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Simulated data ground truth and results for CALDER
Creators
Description
Supporting data for CALDER 2019 publication
- branchsim_results.ipynb: code used to load simulated results and generate figures used in paper
- exome_sim3_groundtruth.pickle: ground truth for simulated datasets, see notebook for usage example
- exome3_s.pickle: results from methods used for benchmarking on simulated data, see notebook for usage example
- calder_util.py: supporting functions used in notebook
- BsimExomeResults.zip: raw result files generated by CALDER, CALDER+pyclone, PhyloWGS, and CITUP on simulated datasets
Files
branchsim_results.ipynb
Files
(2.1 GB)
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