Published July 3, 2018
| Version v1.1
Software
Open
Benchmarking optimization methods for parameter estimation in large kinetic models
Creators
- 1. Consejo Superior de Investigaciones Científicas (CSIC)
- 2. Institute of Computational Biology, Helmholtz Zentrum München
Description
Software to reproduce the results presented in the paper "Benchmarking optimization methods for parameter estimation in large kinetic models". It includes two MATLAB toolboxes: AMICI and MEIGO, as well as MATLAB code to define the optimizations and to report the results as figures, tables, and summary files.