Published December 31, 2022 | Version v1
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Molecular profiling of bacterial blight resistance in Malaysian rice cultivars

  • 1. University of the Punjab, Faculty of Agricultural Sciences, Department of Plant Breeding and Genetics, Lahore, Pakistan & Universiti Teknologi Malaysia - UTM Skudai, Faculty of Science, Department of Biosciences, Johor Bahru, Malaysia
  • 2. University of the Punjab, Department of Food Science and Technology, Faculty of Agricultural Sciences, Lahore, Pakistan
  • 3. University of the Punjab, Faculty of Agricultural Sciences, Department of Plant Breeding and Genetics, Lahore, Pakistan
  • 4. University of the Punjab, Faculty of Agricultural Sciences, Department of Entomology, Lahore, Pakistan
  • 5. Cotton Research Institute Multan, Multan, Pakistan
  • 6. Sorghum Research Sub Station, Dera Ghazi Khan, Pakistan
  • 7. Ondokuz Mayis University, Faculty of Agriculture, Department of Agricultural Biotechnology, Samsun, Turkey
  • 8. Tarbiat Modarres University, Faculty of Science, Department of Plant Science, Tehran, Iran
  • 9. Universiti Teknologi Malaysia - UTM Skudai, Faculty of Science, Department of Biosciences, Johor Bahru, Malaysia & University of the Punjab, Faculty of Agricultural Sciences, Department of Plant Breeding and Genetics, Lahore, Pakistan

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Javed, M. A., Ali, S. W., Ashfaq, M., Tabassam, J., Ali, M., IhsanUllah, M., Nayab, S. F., Kaya, Y., Khalili, E., Ali, Q., Yau, T. E. (2022): Molecular profiling of bacterial blight resistance in Malaysian rice cultivars. Brazilian Journal of Biology (e256189) 82: 1-8, DOI: 10.1590/1519-6984.256189, URL: http://dx.doi.org/10.1590/1519-6984.256189

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References

  • JAMALODDIN, M., DURGA RANI, C.V.,SWATHI, G.,ANURADHA, C., VANISRI, S.,RAJAN, C.P.D.,KRISHNAM RAJU, S.,BHUVANESHWARI, V.,JAGADEESWAR, R.,LAHA , G.S.,PRASAD , M.S.,SATYANARAYANA , P.V., CHERALU, C., RAJANI, G., RAMPRASAD, E., SRAVANTHI, P., ARUN PREM KUMAR, N., ARUNA KUMARI, K., YAMINI, K.N., MAHESH, D.,SANJEEV RAO, D.,SUNDARAM, R.M. andMADHAV, M.S., 2020. Marker Assisted Gene Pyramiding (MAGP) for bacterial blight and blast resistance into mega rice variety "Tellahamsa". PLoS One, vol. 15, no. 6, pp. e0234088. http:// dx.doi.org/10.1371/journal.pone.0234088. PMid:32559183.
  • KHAN, M.W., ABBASI, F.M., MASOOD, M.S., RABBANI, A., ABBASI, M.F., SAJID, M. and AHMAD, H., 2015.Identification of bacterial blight resistance gene xa7 in rice (Oryzae sativa L.) through STS marker. International Journal of Biosciences, vol. 6, no. 2, pp. 318-324. http://dx.doi.org/10.12692/ijb/6.2.318-324.
  • KUMAR, A., KUMAR, R., SENGUPTA, D., DAS, S.N., PANDEY, M.K., BOHRA, A.,SHARMA , N.K., SINHA, P., SK, H., GHAZI, I.A.,LAHA, G.S. and SUNDARAM, R.M., 2020. Deployment of genetic and genomic tools toward gaining a better understanding of ricexanthomonas oryzae pv.oryzae interactions for development of durable bacterial blight resistant rice.Frontiers in Plant Science, vol. 11, pp. 1152. http://dx.doi.org/10.3389/fpls.2020.01152. PMid:32849710.
  • KUMAR, M., SINGH, R.P., SINGH, O.N., SINGH, P., ARSODE, P., JENA, D., SAMANTARAY, S. and VERMA, R., 2019. Generation mean analysis for bacterial blight resistance and yield traits in rice. Journal of Pharmacognosy and Phytochemistry, vol. 8, no. 4, pp. 2120-2124.
  • MAYER, L., DA SILVA, W.P., MOURA, A.B. and VENDRUSCOLO, C.T., 2010. AFLP analysis of Xanthomonas axonopodis and X. arboricola strains used in xanthan production studies reveal high level of polymorphism.Brazilian Journal of Microbiology, vol. 41, no. 3, pp. 741-748. http://dx.doi.org/10.1590/S1517- 83822010000300026. PMid:24031551.
  • MCCOUCH, S.R., KOCHERT, G., YU, Z.H., WANG, Z.Y., KHUSH, G.S., COFFMAN, W.R.andTANKSLEY, S.D., 1988.Molecular mapping of rice chromosomes. Theoretical and Applied Genetics, vol.76, no. 6, pp. 815-829. http://dx.doi.org/10.1007/BF00273666. PMid:24232389.
  • MEW, T.W., 1987. Current status and future prospects of research on bacterial blight of rice. Annual Review of Phytopathology, vol. 25, no. 1, pp. 359-382. http://dx.doi.org/10.1146/annurev. py.25.090187.002043.
  • MUHAMMAD, S., TAHIRA, B., HAFIZ, U.F., ZULQARNAIN, H., IMAD, N., ABID, M. andMUHAMMAD, A., 2016.Molecular screening of rice (Oryza sativa L.) germplasm for Xa4, xa5 and Xa21 bacterial leaf blight (BLB) resistant genes using linked marker approach. African Journal of Biotechnology, vol.15, no. 41, pp. 2317-2324. http://dx.doi.org/10.5897/AJB2016.15612.
  • NEI, M., 1972. Genetic distance between populations. American Naturalist, vol. 106, no. 949, pp. 283-292. http://dx.doi. org/10.1086/282771.
  • NINO-LIU, D.O., RONALD, P.C. and BOGDANOVE, A.J., 2006. Xanthomonas oryzae pathovars: model pathogens of a model crop.Molecular Plant Pathology, vol. 7, no. 5, pp. 303-324.http:// dx.doi.org/10.1111/j.1364-3703.2006.00344.x. PMid:20507449.
  • NOREEN, R., KHAN, S., RABBANI, A., KANWAL, A. and UZAIR, B., 2020. Screening of different rice (Oryza sativa l.) varieties for genetic diversity and bacterial blight resistance gene.Pakistan Journal of Botany, vol. 52, no. 3, pp. 1087-1096. http://dx.doi. org/10.30848/PJB2020-3(41).
  • PERUMALSAMY, S.,BHARAN, M.,SUDHA , M.,NAGARAJAN, P.,ARUL, L., SARASWATHI, R.,BALASUBRAMANIAN, P.andRAMALINGAM, J., 2010.Functional marker-assisted selection for bacterial leaf blight resistance genes in rice (Oryza sativa L.).Plant Breeding, vol. 129, no. 4, pp. 400-406. http://dx.doi.org/10.1111/j.1439- 0523.2009.01705.x.
  • PHA, N.T. and LAN, N.T., 2004. Marker assisted selection in rice breeding for bacterial leaf blight.Omon Rice, vol.12, pp. 19-26.
  • PINTA, W.,TOOJINDA , T.,THUMMABENJAPONE , P.andSANITCHON, J., 2013.Pyramiding of blast and bacterial leaf blight resistance genes into rice cultivar RD6 using marker assisted selection. African Journal of Biotechnology, vol.12, no. 28, pp. 4432-4438. http://dx.doi.org/10.5897/AJB12.2028.
  • PRABAKARAN, A.,PARAMASIVAM, K.,RAJESH, T.andRAJARAJAN, D., 2010.Molecular of rice land races using SSR markers.Electronic Journal of Plant Breeding, vol. 1, pp. 512-516.
  • PRADHAN, A., THAKUR, A. and SONBOIR, H.L., 2014. Response of rice (Oryza sativa) varieties to different levels of nitrogen under rainfed aerobic ecosystem.Indian Journal of Agronomy, vol. 59, no. 1, pp. 76-79.
  • PRADHAN, S.K., NAYAK, D.K., MOHANTY, S., BEHERA, L., BARIK, S.R.,PANDIT, E.,LENKA , S.andANANDAN, A., 2015.Pyramiding of three bacterial blight resistance genes for broad spectrum resistance in deepwater rice variety Jalmagna.Rice (New York, N.Y.), vol.8, no. 1, pp. 51.http://dx.doi.org/10.1186/s12284-015- 0051-8. PMid:26054243.
  • RAJPUROHIT, D., KUMAR, R., KUMAR, M., PAUL, P., AWASTHI, A., OSMAN BASHA, P.,PURI, A.,JHANG, T.,SINGH, K. andDHALIWAL, H.S., 2011. Pyramiding of two bacterial blight resistance and a semi dwarfing gene in Type 3 Basmati using marker-assisted selection. Euphytica, vol. 178, no. 1, pp. 111-126.http://dx.doi. org/10.1007/s10681-010-0279-8.
  • SHANTI, M.L., SHENOY, V.V., LALITHA , D.G., MOHAN, K.V., PREMALATHA, P., NAVEEN, K.G., SHASHIDHAR, H.E., ZEHR, U.B. and FREEMAN, W.H., 2010. Marker-assisted breeding for resistance to bacterial leaf blight in popular cultivar and parental lines of hybrid rice. Journal of Plant Pathology, vol. 1, no. 3, pp. 495-501. http://dx.doi.org/10.4454/jpp.v92i2.194.
  • SOMBUNJITT, S.,SRIWONGCHAI, T.,KULEUNG, C.andHONGTRAKUL, V., 2017.Searching for and analysis of bacterial blight resistance genes from Thailand rice germplasm. Agriculture and Natural Resources (Bangkok), vol. 51, no. 5, pp. 365-375. http://dx.doi. org/10.1016/j.anres.2017.11.001.
  • SONG, J.Y., LEE, G.-A., CHOI, Y.-M., LEE, S., LEE, K.B., BAE, C.-H., JUNG, Y., HYUN, D.-Y., PARK, H.-J. and LEE, M.-C., 2014. Blast resistant genes distribution and resistance reaction to blast in korean landraces of rice (Oryza sativa L.). Korean Journal of Plant Resources, vol. 27, no. 6, pp. 687-700. http://dx.doi. org/10.7732/kjpr.2014.27.6.687.
  • SONG, W.Y.,WANG , G.L.,CHEN , L.L.,KIM , H.S.,PI , L.Y.,HOLSTEN , T., GARDNER , J., WANG, B., ZHAI, W.X.,ZHU, L.H.,FAUQUET, C.and RONALD, P.1995.A receptor kinase-like protein encoded by the rice disease resistance gene, xa21. Science, vol. 270, no. 5243, pp.1804-1806.http://dx.doi.org/10.1126/science.270.5243.1804 . PMid:8525370.
  • SUH, J.P., NOH, T.H., KIM, K.Y., KIM, J.J., KIM, Y.G. and JENA, K.K., 2009. Expression levels of three bacterial blight resistance genes against K3a race of Korea by molecular and phenotype analysis in japonica rice (O. sativa L.). Journal of Crop Science and Biotechnology, vol. 12, no. 3, pp. 103-108. http://dx.doi. org/10.1007/s12892-009-0103-y.
  • SUN, X., YANG, Z., WANG, S. and ZHANG, Q., 2003. Identification of a 47-kb DNA fragment containing xa4, a locus for bacterial blight resistance in rice. Theoretical and Applied Genetics, vol. 106, no. 4, pp. 683-687.http://dx.doi.org/10.1007/s00122-002- 1117-8. PMid:12595998.
  • WANG, J.,TIAN, D., GU, K.,YANG, X.,WANG, L., ZENG, X. and YIN, Z., 2017.Induction of Xa10-like genes in rice cultivar Nipponbare confers disease resistance to rice bacterial blight. Molecular Plant-Microbe Interactions, vol. 30, no. 6, pp. 466-477. http:// dx.doi.org/10.1094/MPMI-11-16-0229-R. PMid:28304228.
  • WU, K.S. and TANKSLEY, S.D., 1993. Abundance, polymorphism and genetic mapping of microsatellites in rice. Molecular & General Genetics : MGG, vol. 241, no. 1-2, pp. 225-235. http:// dx.doi.org/10.1007/BF00280220. PMid:7901751.
  • YANG, Z., SUN, X., WANG, S. and ZHANG, Q., 2003. Genetic and physical mapping of a new gene for bacterial blight resistance in rice. Theoretical and Applied Genetics, vol. 106, no. 8, pp. 1467-1472. http://dx.doi.org/10.1007/s00122-003-1205-4. PMid:12750790.