shenwei356/taxonkit: TaxonKit v0.17.0

Changes

• TaxonKit v0.17.0
  • taxonkit filter:
    • Fix keeping taxids with a rank of "no rank" or "clade". #97
  • taxonkit list:
    • Accept input TaxIds from stdin/files, not just the flag --ids. #93
  • taxonkit name2taxid:
    • Add support of fuzzy match with -f/--fuzzy. #88
  • taxonkit profile2cami:
    • Add a new flag -S/--no-sum-up to disable summing up abundances. #99

Please cite

Shen, W., Ren, H., TaxonKit: a practical and efficient NCBI Taxonomy toolkit, Journal of Genetics and Genomics, https://doi.org/10.1016/j.jgg.2021.03.006

Links

Tips

• run taxonkit version to check update !!!
• run taxonkit genautocomplete to update Bash completion !!!

OS |Arch |File, 中国镜像 |Download Count :------|:---------|:-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Linux |64-bit|taxonkit_linux_amd64.tar.gz,<br/> 中国镜像 | Linux |arm64 |taxonkit_linux_arm64.tar.gz,<br/> 中国镜像 | macOS |64-bit|taxonkit_darwin_amd64.tar.gz,<br/> 中国镜像 | macOS |arm64 |taxonkit_darwin_arm64.tar.gz,<br/> 中国镜像 | Windows|64-bit|taxonkit_windows_amd64.exe.tar.gz,<br/> 中国镜像|