Published April 16, 2020 | Version v1
Journal article Open

The fossil record of camelids demonstrates a late divergence between Bactrian camel and dromedary

Description

Geraads, Denis, Didier, Gilles, Barr, W. Andrew, Reed, Denne, Laurin, Michel (2020): The fossil record of camelids demonstrates a late divergence between Bactrian camel and dromedary. Acta Palaeontologica Polonica 65 (2): 251-260, DOI: 10.4202/app.00727.2020, URL: http://dx.doi.org/10.4202/app.00727.2020

Files

source.pdf

Files (259.0 kB)

Name Size Download all
md5:804d809541068f604b0f66f56cf4615a
259.0 kB Preview Download

Linked records

Additional details

Identifiers

LSID
urn:lsid:plazi.org:pub:804DFF9541068F604B0FFFF5FFF4615A

Related works

Cites
Publication: 10.1093/sysbio/syaa021] (DOI)
Publication: 10.1007/s10914-019-09489-2] (DOI)
Publication: 10.3389/fgene.2016.00035] (DOI)
Has part
Figure: 10.5281/zenodo.12195820 (DOI)
Figure: 10.5281/zenodo.12195822 (DOI)

References

  • Alberdi, M.T., Morales, J., Moya, S., and Sanchiz, B. 1981. Macrovertebrados (Reptilia y Mammalia) del yacimiento finimioceno de Librilla (Murcia). Estudios geologicos 37: 307-312
  • Almecija, S., Orr, C.M., Tocheri, M.W., Patel, B.A., and Jungers, W.L. 2015. Exploring phylogenetic and functional signals in complex morphologies: The hamate of extant anthropoids as a test-case study. The Anatomical Record 298: 212-229.
  • Baigusheva, V.S. 1971. Fossil theriofauna of the Liventzovka sand-pit [in Russian]. Trudy Zoologiceskogo instituta 49: 5-29.
  • Beech, M., Mashkour, M., Huels, M., and Zazzo, A. 2009. Prehistoric camels in south-eastern Arabia: the discovery of a new site in Abu Dhabi's Western Region, United Arab Emirates. Papers from the forty-second meeting of the Seminar for Arabian Studies held in London, 24-26 July 2008. Proceedings of the Seminar for Arabian Studies 39: 17-30.
  • Benecke, N. 1994. Der Mensch und seine Haustiere: die Geschichte einer jahrtausendealten Beziehung. 470 pp. Theiss, Stuttgart.
  • Benton, M.J. and Donoghue, P.C.J. 2007. Paleontological evidence to date the tree of life. Molecular Biology and Evolution 24: 26-53.
  • Benton, M.J., Donoghue, P.C., Asher, R.J., Friedman, M., Near, T.J., and Vinther, J. 2015. Constraints on the timescale of animal evolutionary history. Palaeontologia Electronica 18: 1-107.
  • Bertrand, Y., Pleijel, F., and Rouse, G.W. 2006. Taxonomic surrogacy in biodiversity assessments, and the meaning of Linnaean ranks. Systematics and Biodiversity 4: 149-159.
  • Boule, M., Breuil, H. Licent, E., and Teilhard de Chardin, P. 1928. Le Paleolithique de la Chine. Archives de l'Institut de Paleontologie humaine 4: 1-138.
  • Bouysse, P., Acharyya, S.K., Brezhnev, V.D., et al. 2000. Geological Map of the World. Commission for the Geological Map of the World and the UNESCO, Paris.
  • Bulliett, R.W. 1975. The Camel and the Wheel. 327 pp. Harvard University Press, Cambridge.
  • Carrillo, J.D. and Asher, R.J. 2017.An exceptionally well-preserved skeleton of Thomashuxleya externa (Mammalia, Notoungulata), from the Eocene of Patagonia, Argentina. Palaeontologia Electronica 20.2.34A: 1-33.
  • Colbert, E.H. 1935. Siwalik Mammals in the American Museum of Natural History. Transactions of the American Philosophical Society 26: 1-401.
  • Compagnoni, B. and Tosi, M. 1978. The camel: its distribution and state of domestication in the Midle East during the third millenium B.C. in light of finds from Shahr-I Sokhta. In: R.H. Meadow and M.A. Zeder (eds.), Approaches to Faunal Analysis in the Middle East. Peabody Museum Bulletin 2: 91-98.
  • Cui, P., Ji, R., Ding, F., Qi, D., Gao, H., Meng, H., Yu, J., Hu, S., and Zhang, H. 2007. A complete mitochondrial genome sequence of the wild two-humped camel (Camelus bactrianus ferus): an evolutionary history of Camelidae. BMC Genomics 8: 241.
  • Davies, T.W., Bell, M.A., Goswami,A., and Halliday, T.J. 2017. Completeness of the eutherian mammal fossil record and implications for reconstructing mammal evolution through the Cretaceous/Paleogene mass extinction. Paleobiology 43: 521-536.
  • Didier, G. 2019. DateFBD [software]. https://github.com/gilles-didier/ DateFBD
  • Didier, G. and Laurin, M. 2020. Exact distribution of divergence times from fossil ages and tree topologies. Systematic Biology syaa021 [published online, https://doi.org/10.1093/sysbio/syaa021].
  • Didier, G., Fau, M., and Laurin, M. 2017. Likelihood of tree topologies with fossils and diversification rate estimation. Systematic Biology 66: 964-987.
  • Dong, W., Hou, Y., Yang, Z., Zhang, L., Zhang, S., and Liu, Y. 2014. Late Pleistocene mammalian fauna from Wulanmulan Paleolithic Site. Quaternary International 347: 139-147.
  • Faith, D.P. 1992. Conservation evaluation and phylogenetic diversity. Biological Conservation 61: 1-10.
  • Falconer, H., and Cautley, P.T. 1836. Note on the fossil camel of the Sivalik Hills. Asiatic Researches 19: 115-134.
  • Fountaine, T.M.R., Benton, M.J., Dyke, G.J., and Nudds, R.L. 2005. The quality of the fossil record of Mesozoic birds. Proceedings of the Royal Society of London, Series B 272: 289-294.
  • Frick, C. 1921. Extinct vertebrate faunas of the badlands of Bautista creek and San Timoteo canon, Southern California. University of California Publications, Bulletin of the Department of Geology 12: 277-424.
  • Gasparini, G.M., De los Reyes, M., Francia, A., Scherer, C.S., and Poire, D.G. 2017. The oldest record of Hemiauchenia Gervais and Ameghino (Mammalia, Cetartiodactyla) in South America: Comments about its paleobiogeographic and stratigraphic implications. Geobios 50: 141-153.
  • Gaur, R., Raghavan, P., and Chopra, S.R.K. 1984. On the remains of Camelus sivalensis (Artiodactyla, Camelidae) from Pinjor Formation of Upper Sivaliks. Indian Journal of Earth Sciences 11: 158-165.
  • Geraads, D. 2014. Camelus grattardi nov. sp., a new camel from the Shungura Formation, Omo valley, Ethiopia, and the relationships of African fossil Camelidae (Mammalia). Journal of Vertebrate Paleontolology 34: 1481-1485.
  • Geraads, D. and Bernoussi, R. 2016. Suidae and Camelidae. In: J.-P. Raynal and A. Mohib (eds.), Prehistoire de Casablanca. 1. La Grotte des Rhinoceros (Fouilles 1991 et 1996). Villes et Sites Archeologiques du Maroc 6: 133-134.
  • Geraads, D., Barr, W.A., Reed, D., Laurin, M., and Alemseged, Z. 2019. New remains of Camelus grattardi (Mammalia, Camelidae) from the Plio-Pleistocene of Ethiopia and the phylogeny of the genus. Journal of Mammalian Evolution [published online, https://doi.org/10.1007/ s10914-019-09489-2].
  • Goloboff, P.A. and Catalano, S.A. 2016. TNT version 1.5, including a full implementation of phylogenetic morphometrics. Cladistics 32: 221-238.
  • Goloboff, P.A., Farris, J., and Nixon, K. 2003. TNT, Tree Analysis Using New Technology [software]. www.lillo.org.ar/phylogeny/tnt
  • Guindon, S. 2018. Accounting for calibration uncertainty: Bayesian molecular dating as a "doubly intractable" problem. Systematic Biology 67: 651-661.
  • Harris, J. M. 1991. Camelidae. In: J.M. Harris (ed.), Koobi Fora Research Project. Volume 3: The Fossil Ungulates: Geology, Fossil Artiodactyls and Palaeoenvironments, 86-91. Clarendon Press, Oxford.
  • Harrison, J.A. 1985. Giant camels from the Cenozoic of North America. Smithsonian contributions to Paleobiology 57: 1-29.
  • Heath, T.A., Huelsenbeck, J.P., and Stadler, T. 2014. The fossilized birth-death process for coherent calibration of divergence-time estimates. Proceedings of the National Academy of Sciences 111: E2957-E2966.
  • Heintzman, P.D., Zazula, G.D., Cahill, J.A., Reyes, A.V., MacPhee, R.D., and Shapiro, B. 2015. Genomic data from extinct North American Camelops revise camel evolutionary history. Molecular Biology and Evolution 32: 2433-2440.
  • Hennig, W. 1981. Insect Phylogeny. xi + 514 pp. John Wiley and Sons, Chichester.
  • Hohna, S., Stadler, T., Ronquist, F., and Britton, T. 2011. Inferring speciation and extinction rates under different sampling schemes. Molecular Biology and Evolution 28: 2577-2589.
  • Honey, J.G., Harrison, J.A., Prothero, D.R., and Stevens, M.S. 1998. Camelidae. In: C.M. Janis, K.M. Scott, and L.L. Jacobs (eds.), Evolution of Tertiary Mammals of North America, 439-462. Cambridge University Press, Cambridge.
  • Khaveson, I.I. 1950. Camels of the genus Paracamelus [in Russian]. Doklady Akademi Nauk SSSR 70: 917-920.
  • Khaveson, I.I. 1954. Camels from the Tertiary of the Oriental hemisphere (genus Paracamelus) [in Russian]. Trudy Paleontologiceskogo instituta 47: 100-162.
  • Khisarova, G.D. 1963. Fossil mammal bones from Koshkurgan, South Kazakhstan [in Rusiian]. In: Materialy pro istorii fauny i flory Kazahstana 4, 50-67. Akademia Nauk, Alma Ata.
  • Kimura, Y., Hawkins, M.T., McDonough, M.M., Jacobs, L.L., and Flynn, L.J. 2015. Corrected placement of Mus-Rattus fossil calibration forces precision in the molecular tree of rodents. Scientific Reports 5: 14444.
  • Kostopoulos, D.S. and Sen, S. 1999. Late Pliocene (Villafranchian) mammals from Sarikol Tepe, Ankara, Turkey. Mitteilungen der Bayerischen Staatssammlung fur Palaontologie und historische Geologie 39: 165-202.
  • Kozhamkulova, B.S. 1986. The late Cenozoic two-humped (Bactrian) camels of Asia. Quartarpalaontologie 6: 93-97.
  • Kumar, S. and Hedges, S.B. 2011. Timetree2: Species Divergence Times on the Iphone. Bioinformatics 27: 2023-2024.
  • Laurin, M. 2012. Recent progress in paleontological methods for dating the Tree of Life. Frontiers in Genetics 3: 1-16.
  • Legendre, L.J., Guenard, G., Botha-Brink, J., and Cubo, J. 2016. Palaeohistological evidence for ancestral high metabolic rate in archosaurs. Systematic Biology 65: 989-996.
  • Liedtke, H.C., Gower, D.J., Wilkinson, M., and Gomez-Mestre, I. 2018. Macroevolutionary shift in the size of amphibian genomes and the role of life history and climate. Nature Ecology and Evolution 2: 1792- 1799.
  • Likius, A., Brunet, M., Geraads, D., and Vignaud, P. 2003. Le plus vieux Camelidae (Mammalia, Artiodactyla) d'Afrique: limite Mio-Pliocene, Tchad. Bulletin de la Societe geologique de France 174: 187-193.
  • Logvynenko, V.N. 2000. The camels (Camelidae, Tylopoda) from the Pliocene and Eopleistocene of Ukraine [in Ukrainian]. Vestnik zoologii, Supplement 14: 120-127.
  • Logvynenko, V.N.2001. Paracamelus minor (Camelidae,Tylopoda)-a new camelid species from the Middle Pliocene of Ukraine [in Ukrainian]. Vestnik zoologii 35: 39-42.
  • Marjanovic, D. and Laurin, M. 2007. Fossils, molecules, divergence times, and the origin of lissamphibians. Systematic Biology 56: 369-388.
  • Marjanovic, D. and Laurin, M. 2008. Assessing confidence intervals for stratigraphic ranges of higher taxa: the case of Lissamphibia. Acta Palaeontologica Polonica 53: 413-432.
  • Martini, P. and Geraads, D. 2018. Camelus thomasi (Mammalia, Camelidae) from the type-locality Tighennif, Algeria. Geodiversitas 40: 115-134.
  • Martini, P., Costeur, L., Le Tensorer, J.-M., and Schmid, P. 2015. Pleistocene camelids from the Syrian desert: the diversity in El Kowm. Anthropologie 119: 687-693.
  • Ming, L., Yuan, L., Yi, L., et al. 2020. Whole-genome sequencing of 128 camels across Asia reveals origin and migration of domestic bactrian camels. Communications Biology 3 (1): 1-9.
  • Morales, J. 1984. Venta del Moro: su macrofauna de mamiferos, y bioestratigrafia continental del Mioceno terminal Mediterraneo. 327 pp. Ph.D. Thesis, Universidad Complutense de Madrid, Madrid.
  • Nagel, D., Pronin, K., Pytlik, I., Urbanek, C., Ivanoff, D., and Semenov, Y. 2004. Die Pliozane Fauna Der Katakomben Von Odessa (Ukraine). Berichte der Institut fur Erdwisenschaften der Universitat Graz 9: 278-280.
  • Nee, S., May, R.M., and Harvey, P.H. 1994. The reconstructed evolutionary process. Philosophical Transactions of the Royal Society of London, Series B 344: 305-311.
  • O'Leary, M.A., Bloch, J.I., Flynn, J.J., et al. 2013. The placental mammal ancestor and the post-K-Pg radiation of placentals. Science 339: 662-667.
  • Organ, C.L., Canoville, A., Reisz, R.R., and Laurin, M. 2011. Paleogenomic data suggest mammal-like genome size in the ancestral amniote and derived large genome size in amphibians. Journal of Evolutionary Biology 24: 372-380.
  • Parham, J.F., Donoghue, P.C.J., Bell, C.J., et al. 2012. Best practices for justifying fossil calibrations. Systematic Biology 61: 346-359.
  • Patnaik, R. 2014. Phylogeny of Siwalik murine rodents: Implications for Mus-Rattus divergence time. Journal of the Paleontological Society of India 59: 15-28.
  • Perez-Lorente, F., Herrero, C., Herrero, E., and Montoya, P. 2009. Paracamelichnum jumillensis, n. ichnogen. n. ichnosp., Upper Miocene Camelidae ichnites from the Hoya de la Sima site (Murcia, Spain). Ichnos 16: 208-219.
  • Pickford, M., Morales, J., and Soria, D. 1995. Fossil camels from the upper Miocene of Europe: implications for biogeography and faunal change. Geobios 28: 641-650.
  • Plummer, M., Best, N., Cowles, K., and Vines, K. 2006. CODA: Convergence diagnosis and output analysis for MCMC. R News 6: 7-11.
  • Pyron, R.A. 2011. Divergence-time estimation using fossils as terminal taxa and the origins of Lissamphibia. Systematic Biology 60: 466-481.
  • Quental, T.B. and Marshall, C.R. 2009. Extinction during evolutionary radiations: reconciling the fossil record with molecular phylogenies. Evolution 63: 3158-3167.
  • Qiu, Z.-X., Qiu, Z.-D., Deng, T., Li, C.-K., Zhang, Z.-Q., Wang, B.-Y., and Wang, X. 2013. Neogene land mammal stages/ages of China. In: X. Wang, L.J. Flynn, and M. Fortelius (eds.), Fossil Mammals of Asia. 30-83. Columbia University Press, New York.
  • Rabosky, D.L. 2009. Heritability of extinction rates links diversification patterns in molecular phylogenies and fossils. Systematic Biology 58: 629-640.
  • Radulescu, C. and Burlacu, D. 1993. On the presence of Paracamelus alutensis (Gr. Stefanescu) (Camelidae, Mammalia) at Fratesti (Giurgiu Dept., Romania). Analele Universitatii Bucuresti, Geologie 42: 65-68.
  • Ronquist, F., Klopfstein, S., Vilhelmsen, L., Schulmeister, S., Murray, D.L., and Rasnitsyn, A. 2012a. A total-evidence approach to dating with fossils, applied to the early radiation of the Hymenoptera. Systematic Biology 61: 973-999.
  • Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Hohna, S., Larget, B., Liu, L., Suchard, M. A., and Huelsenbeck, J.P. 2012b. MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542.
  • Rowan, J., Martini, P., Likius, A., Merceron, G., and Boisserie, J.-R. 2018. New Pliocene remains of Camelus grattardi (Mammalia, Camelidae) from the Shungura Formation, Lower Omo Valley, Ethiopia, and the evolution of African camels. Historical Biology 31: 1123-1134.
  • Sahni, M.R. and Khan, E. 1988. Pleistocene Vertebrate Fossils and Prehistory of India. 90 pp. Books and Books, New Delhi.
  • Sanmartin, I. and Meseguer, A.S. 2016. Extinction in phylogenetics and biogeography: From timetrees to patterns of biotic assemblage. Frontiers in Genetics 7 [published online, https://doi.org/10.3389/fgene. 2016.00035].
  • Sauquet, H. 2013. A practical guide to molecular dating. Comptes rendus Palevol 12: 355-367.
  • Shaul, S. and Graur, D. 2002. Playing chicken (Gallus gallus): Methodological inconsistencies of molecular divergence date estimates due to secondary calibration points. Gene 300: 59-61.
  • Soul, L.C. and Friedman, M. 2017. Bias in phylogenetic measurements of extinction and a case study of end-Permian tetrapods. Palaeontology 60: 169-185.
  • Springer, M.S., Emerling, C.A., Meredith, R.W., Janecka, J.E., Eizirik, E., and Murphy, W.J. 2017. Waking the undead: Implications of a soft explosive model for the timing of placental mammal diversification. Molecular Phylogenetics and Evolution 106: 86-102.
  • Springer, M.S., Murphy, W.J., Eizirik, E., and O'Brien, S.J. 2003. Placental mammal diversification and the Cretaceous-Tertiary boundary. Proceedings of the National Academy of Sciences 100 (3): 1056-1061.
  • Stefanescu, G. 1895. Le chameau fossile de Roumanie. Anuarulu Museului de Geologia si de Paleontologia 1894: 91-123.
  • Sterli, J., Pol, D., and Laurin, M. 2013. Incorporating phylogenetic uncertainty on phylogeny-based paleontological dating and the timing of turtle diversification. Cladistics 29: 233-246.
  • Svistun, V.I. 1971. New findings of camel (Tylopoda, Camelidae) remains in Pontian deposits of the South of the USSR European part [in Russian]. Vestnik zoologii 1: 64-68.