Published June 17, 2024
| Version v1
Journal article
Open
A mouse model with high clonal barcode diversity for joint lineage, transcriptomic, and epigenomic profiling in single cells
Creators
- 1. Stem Cell Program, Boston Children's Hospital, Boston, MA, USA; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA.
- 2. Department of Systems Biology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA
- 3. Westlake Laboratory of Life Sciences and Biomedicine, Hangzhou, Zhejiang, China; School of Life Sciences, Westlake University, Hangzhou, Zhejiang 310024, China; School of Science, Westlake University, Hangzhou, Zhejiang 310024, China.
Description
The repository at https://github.com/ShouWenWang-Lab/snakemake_DARLIN provides instructions and code about for allele preprocessing, the repository at https://github.com/ShouWenWang-Lab/MosaicLineage provides instructions and code for clonal downstream analysis. All the raw data are deposited in NCBI GEO: GSE222486. This archive stores the intermediate and output files in our study related to Figure 4 and Figure 5.
Files
DARLIN_public.zip
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