Published December 24, 2017
| Version v1
Dataset
Open
GROMOS-CKP POPS simulations (versions 1 and 2) 298 K with GROMOS NH3 charges and PME
Creators
Description
GROMOS-CKP POPS simulations (298 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are taken from the standard GROMOS force field parameters. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
Files
Files
(317.5 MB)
Name | Size | Download all |
---|---|---|
md5:c132766f8d1a9b2dfeebacb1cd3f9fb7
|
758.4 kB | Download |
md5:1502976e47db555b91289071f5b8115a
|
758.4 kB | Download |
md5:3eeb179365fbceda1154d4a04411b0d5
|
3.1 MB | Download |
md5:fea145efe10892144ad5ad6b69b4390e
|
153.5 MB | Download |
md5:da27d3b5357fa4408ebe32ea4bae4487
|
3.1 MB | Download |
md5:bb5ad0b7b9a23bef1cd27ac28f0b65ea
|
153.5 MB | Download |
md5:dfc2704370c7d788d79df5b76551e6d1
|
1.4 MB | Download |
md5:29f6271b467ff1c43cb3d2a6d9645feb
|
1.4 MB | Download |