Published May 22, 2024
| Version 1.0
Model
Open
Atlases and segmentation models for automated quantitative analysis of peri-articular bone microarchitecture in HR-pQCT knee images
Creators
-
1.
University of Calgary
Description
This zenodo upload contains atlases for doing atlas-based segmentation of the femoral condyles and tibial plateaus, and UNet++ hyperparameter and checkpoint files for doing ensemble inference bone segmentation. Usage instructions are provided in the linked repositories.
https://github.com/Bonelab/hrpqct-knee-segmentation
https://github.com/Bonelab/HRpQCT-Knee-Seg
Files
knee_segmentation.zip
Files
(238.9 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:f2b900ce0741192120bf73ca9f9be546
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238.9 MB | Preview Download |
Additional details
Funding
- Arthritis Society
- PhD Salary Award TGP-21-0000000093
- Canadian Institutes of Health Research
- Project Grant PJT 162189
Software
- Repository URL
- https://github.com/Bonelab/hrpqct-knee-segmentation
- Programming language
- Python
- Development Status
- Active