Published October 24, 2023
| Version v3
Dataset
Open
A Bioconductor workflow for processing, evaluating and interpreting expression proteomics data
- 1. Cambridge Center for Proteomics, Department of Biochemistry, University of Cambridge
- 2. Department of Biochemistry, University of Cambridge
Description
Files for users of the workflow "A Bioconductor workflow for processing, evaluating and interpreting expression proteomics data". Files include Proteome Discoverer (v2.5) processing and consensus workflows for both TMT and LFQ expression proteomics data. Also provided are the output .txt files of a corresponding Proteome Discoverer identification search, as required for users to follow the workflow themselves. For raw data please refer to PRIDE. Appendix is provided as a PDF.
Files
appendix.pdf
Files
(82.9 MB)
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Additional details
Funding
Software
- Repository URL
- https://github.com/CambridgeCentreForProteomics/f1000_expression_proteomics
- Programming language
- R