TRISTAN-ORF/transcript_transformer: 0.8.0

Features

• --pretrain Support for pre-training a new models using ribosome profiling data. It is now possible to apply RiboTIE on new species
• --parallel : Support for parallel processing of ribo-seq samples for easy deployment on HPC servers.
• Ability to process multiple separate config files. As such, it is possible to group settings together. e.g. ribotie base.yml samples.yml pretrained_model.yml
• --version flag

Changes

• refactor : --ribo to --samples
• updated config file handling
  • multiple configs
  • all arguments
  • allow overwriting (yaml parsed before bash arguments)