Models for rapid estimates of leaf litter chemistry using reflectance spectroscopy
Description
Measuring the chemical traits of leaf litter is important for understanding plants' roles in nutrient cycles, including through nutrient resorption and litter decomposition, but conventional leaf trait measurements are often destructive and labor-intensive. Here, we develop and evaluate the performance of partial least-squares regression (PLSR) models that use reflectance spectra of intact or ground leaves to estimate leaf litter traits, including carbon and nitrogen concentration, carbon fractions, and leaf mass per area (LMA). Our analyses included more than 300 samples of senesced foliage from 11 species of temperate trees, including needleleaf and broadleaf species. Across all samples, we could predict each trait with moderate-to-high accuracy from both intact-leaf litter spectra (validation R2 = 0.543-0.941; %RMSE = 7.49-18.5) and ground-leaf litter spectra (validation R2 = 0.491-0.946; %RMSE = 7.00-19.5). Notably, intact-leaf spectra yielded better predictions of LMA. Our results support the feasibility of building models to estimate multiple chemical traits from leaf litter of a range of species. In particular, the success of intact-leaf spectral models allows non-destructive trait estimation in a matter of seconds, which could enable researchers to measure the same leaves over time in studies of nutrient resorption.
Notes
Methods
This repository contains coefficients for partial least-squares regression models trained to predict leaf litter traits from spectra of intact or ground leaves. Models for intact leaves were trained either on the full spectrum (400-2400 nm) or subsets (visible and near-infrared, 400-1000 nm; short-wave infrared, 1300-2400 nm).
Files
Models.zip
Files
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Additional details
Related works
- Is cited by
- 10.1101/2023.11.27.568939 (DOI)
- Is derived from
- 10.5281/zenodo.10969388 (DOI)
- https://github.com/ShanKothari/senesced-trait-models (URL)