Published April 19, 2024 | Version v1

Study protocol - NLP-DeVal: Development and validation of a natural language processing tool to enable clinical research in emergency and acute care medicine: retrospective cohort study

  • 1. Istituto Di Ricerche Farmacologiche Mario Negri Laboratori Negri Bergamo
  • 2. Istituto Di Ricerche Farmacologiche Mario Negri
  • 3. Istituto Di Ricerche Farmacologiche Mario Negri IRCCS

Description

Within the eCREAM project, it has been proposed a study to develop and validate a language model (called eCREAM_LM) for the six languages of the project that is able to interpret EHR contents and extract relevant information for research purposes.

This study involves 35 centers from 7 different countries (Italy, Poland, Greece, Slovakia, Slovenia UK, and Switzerland).
The creation of the eCREAM_LM language model will entail training and finetuning different language models through exposure to both a massive amount (billions) of medical texts derived from the literature and a large quantity of non-annotated (millions) and annotated (5,000) clinical notes derived from EHRs.
The validation of eCREAM_LM will be done by assessing its concordance with a panel of experts in extracting crucial information from 3,000 clinical notes.
The study will last 24 months and will involve retrospective data collection.

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eCREAM-NLP-DeVal_protocol_v1.4.pdf

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Additional details

Funding

European Commission
eCREAM - enabling Clinical Research in Emergency and Acute care Medicine through automated data extraction 101057726

Dates

Created
2024-04-12
Date of the final version of the protocol to be submitted to Ethical Committees