Pesticide risk during commercial apple pollination is greater for honeybees than other managed and wild bees

Data and code relating to the manuscript “Pesticide risk during commercial apple pollination is greater for honeybees than other managed and wild bees”

Files are organized as follows

input - contains the main data files.

• all_pesticide2019.csv – contains the pesticide residue data for all samples

• LD50.csv – contains pesticide LD50s in PPB

• ld50_per_bee.csv – contains pesticide LD50s in ug / honeybee

• nesting_type.csv – lists nesting types of the different bee samples

• pesticide_type.csv – lists pesticides by their type

• short_name.csv – lists short bee names

  folder “gis”

  • hive_distance_matrix.csv – distances from each orchard to other sites
  • sitelocation.csv – contains coordinates of sites

code - contains the scripts to analyze the input files

• pesticide_analysis.R – is the main anaylsis for the paper
• unadjusted_pesticide_analysis.R – is a copy of most of the code above but without LD50 weight adjustements

ld50 adjust - contains the inputs and code for the ld50 adjustments I ran

• ld50_adjust.R – is the code to calculate our the adjustements
• 2020_BeeTox_database_acute_contact_publication_final_R1.csv – is the data file taken from pamminger publication