Published April 6, 2024 | Version v1
Dataset Open

vConTACT3 Database v223

Creators

  • 1. The Ohio State University

Description

Compressed database files used by vConTACT3 to classify virus sequences.

This database is version 223 and is derived from NCBI Virus RefSeq release 223, incorporating information from the Virus-Host DB (using GenBank release 259) 

This file is downloaded by vConTACT3 during database setup, and then users can select which domains to use during analysis. Alternatively, users can download these databases (provided through Zenodo.org) manually, expanded to any desired location, and the path to the resulting folder can be passed to vConTACT3.

Full details are provided through the vConTACT3 website and accompanying documentation.

Files

Files (2.0 GB)

Name Size Download all
md5:119d936be615e4899bc5453f026c59f0
2.0 GB Download

Additional details

Software

Repository URL
https://bitbucket.org/MAVERICLab/vcontact3
Programming language
Python
Development Status
Active