Published April 4, 2024 | Version v1
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Datasets for "Depth-enhanced high-throughput microscopy by compact PSF engineering"

  • 1. ROR icon Technion – Israel Institute of Technology

Description

Datasets and code accompanying the paper: "Depth-enhanced high-throughput microscopy by compact PSF engineering". The data is split by two PSF types: Extended-Depth-Of-Field (EDOF) PSF, and the Tetrapod PSF. For EDOF imaging, 3 datasets are included: sparse and dense beads embedded in a gel, and a cellular spheroid imaged with/without the EDOF PSF. For 3D imaging with the Tetrapod PSF, the training/testing data of CellSnap is provided, in addition to a sample of diffusing beads exemplifying the application of nanoparticle tracking analysis.   

Files

EDOF_Beads_high_density.zip

Files (10.5 GB)

Name Size Download all
md5:add39aa4f6f9ce2598785442b33ce3d6
665.0 MB Preview Download
md5:c0c17a599022f72aa39f97fc43228990
649.2 MB Preview Download
md5:36dea13993d5448746509984498d64c1
41.9 MB Preview Download
md5:4c24952e936b27a9f544c2d165555497
47.6 MB Preview Download
md5:36a24bd35d83afda7fe69ee774a4a205
174.6 MB Preview Download
md5:6d8e827b11904c9281f6976cbc161df8
8.9 GB Preview Download

Additional details

Software

Repository URL
https://github.com/EliasNehme/HTPmicroscopy
Programming language
Python, MATLAB
Development Status
Concept